Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0323
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.39 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.4  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +1

Query: 145 LNIPHNLVQSEGPTVDMNAINPTLHKYNTAHLRGKHDVINYDNSSKNQKE 294
           LNIPH++ +  G + +  + N  +H+    H+ G H V NY  + + + E
Sbjct: 171 LNIPHSVKRFPGYSAENKSFNAEMHR---DHIFGLH-VANYMRTLEEEDE 216


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +1

Query: 184 TVDMNAINPTLHKYNTAHLRGKHDVINYDNSSKNQKEHQRFWTLPKRTAE 333
           + +++ I  T H++    L+ +HD++NY+ ++  Q+  Q  +   K   E
Sbjct: 697 SAEVSKIEKTAHRFG--QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIE 744


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 207 PHAAQIQHSASPR 245
           PH +Q QHSASPR
Sbjct: 192 PHHSQQQHSASPR 204


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 406  KISPIDPRASRSFKSSTPSNKENVV 480
            ++SPI P  +  F++STPS ++  +
Sbjct: 1312 ELSPIKPCQTNPFRTSTPSKEDEAL 1336


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 583  APERAESPALSNISLSP 633
            +P R ESP+L+  SLSP
Sbjct: 1003 SPNRLESPSLNESSLSP 1019


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 583  APERAESPALSNISLSP 633
            +P R ESP L+  SLSP
Sbjct: 1001 SPNRLESPGLNESSLSP 1017


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +1

Query: 463 NKENVVDLSCKLLSPVKSTMTNEELYA-VIHKSKKKLNI---KDAPERAESPALSNISL 627
           ++++++D+  ++++  K    N EL    +   KKK      KD PE A +PA + I++
Sbjct: 269 SEDDMLDVCYRIMALYKRGKPNAELLEEAVEALKKKYQEQRKKDRPEAAPAPAPTVITV 327


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 603 RFCSFRCVFNVQFLFTFMNNSVKF 532
           +FC F  +FN+ FLF        F
Sbjct: 5   QFCPFCLLFNLYFLFVVRGTGKPF 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.128    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,482
Number of Sequences: 2352
Number of extensions: 12554
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)