Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0323
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 33 0.13
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 33 0.13
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 33 0.13
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 33 0.13
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 33 0.13
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 31 0.54
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 31 0.54
AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor o... 31 0.54
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 30 1.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 2.2
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 29 2.2
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 29 2.2
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 29 2.9
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical ... 29 3.8
AF016681-3|AAB66173.1| 159|Caenorhabditis elegans Hypothetical ... 28 5.0
AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 28 6.6
AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 28 6.6
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/78 (30%), Positives = 31/78 (39%)
Frame = +1
Query: 241 RGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQDPGQLSAGNSIKISPI 420
R +D ++ QKE Q E QLR S+L Q+ QL KISP
Sbjct: 124 RKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKVSSLEQEAAQLRFLLFSKISPA 183
Query: 421 DPRASRSFKSSTPSNKEN 474
+ S ST +N N
Sbjct: 184 NSEVSCESNDSTETNDSN 201
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 412 SPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDAPE 591
SP+ + S KS TPS KEN L S K+ +E + K+KL+++
Sbjct: 148 SPVSSDMTTS-KSPTPSKKEN--GLMKPPQSTEKAQRKRKESTDIFSSEKRKLSLETVAS 204
Query: 592 RAESPALSNISLSPVSSE 645
+ S SN+S +P S+
Sbjct: 205 SSSSSGSSNLSTTPQRSK 222
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 412 SPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDAPE 591
SP+ + S KS TPS KEN L S K+ +E + K+KL+++
Sbjct: 148 SPVSSDMTTS-KSPTPSKKEN--GLMKPPQSTEKAQRKRKESTDIFSSEKRKLSLETVAS 204
Query: 592 RAESPALSNISLSPVSSE 645
+ S SN+S +P S+
Sbjct: 205 SSSSSGSSNLSTTPQRSK 222
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/78 (30%), Positives = 31/78 (39%)
Frame = +1
Query: 241 RGKHDVINYDNSSKNQKEHQRFWTLPKRTAETNQLRPTSSNLNQDPGQLSAGNSIKISPI 420
R +D ++ QKE Q E QLR S+L Q+ QL KISP
Sbjct: 124 RKNNDAAKRSRDARRQKEEQIASKAHALERENMQLRGKVSSLEQEAAQLRFLLFSKISPA 183
Query: 421 DPRASRSFKSSTPSNKEN 474
+ S ST +N N
Sbjct: 184 NSEVSCESNDSTETNDSN 201
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 412 SPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDAPE 591
SP+ + S KS TPS KEN L S K+ +E + K+KL+++
Sbjct: 148 SPVSSDMTTS-KSPTPSKKEN--GLMKPPQSTEKAQRKRKESTDIFSSEKRKLSLETVAS 204
Query: 592 RAESPALSNISLSPVSSE 645
+ S SN+S +P S+
Sbjct: 205 SSSSSGSSNLSTTPQRSK 222
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 31.5 bits (68), Expect = 0.54
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 256 VINYDNSSKNQKEHQRFWTLPKRTAETNQ 342
VI++D+SS + K+HQ +W++ + Q
Sbjct: 493 VISFDSSSSSDKQHQNYWSISNNNTQLMQ 521
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 31.5 bits (68), Expect = 0.54
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 256 VINYDNSSKNQKEHQRFWTLPKRTAETNQ 342
VI++D+SS + K+HQ +W++ + Q
Sbjct: 493 VISFDSSSSSDKQHQNYWSISNNNTQLMQ 521
>AC024201-12|AAL27266.1| 544|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform b protein.
Length = 544
Score = 31.5 bits (68), Expect = 0.54
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 256 VINYDNSSKNQKEHQRFWTLPKRTAETNQ 342
VI++D+SS + K+HQ +W++ + Q
Sbjct: 493 VISFDSSSSSDKQHQNYWSISNNNTQLMQ 521
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 30.7 bits (66), Expect = 0.94
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +1
Query: 331 ETNQLRPTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPV 510
E N+ S++ + GQ ++ + P DP SR+ S + + NVV+ +L SP
Sbjct: 327 EPNRYENRSASPHSTSGQFPGTSTRRSDPYDPPRSRNSSSISNRARSNVVEEDDELRSPT 386
Query: 511 ---KSTMTNEELYAVIHKSKKKLNIKDAPERAESPALSNISLS 630
++ T+++ A + K + K + A +N S S
Sbjct: 387 PLSRAPTTDDDSDAGSPEEKTHMERKSPDDVAPGNRRNNSSSS 429
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.94
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +1
Query: 331 ETNQLRPTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPV 510
E N+ S++ + GQ ++ + P DP SR+ S + + NVV+ +L SP
Sbjct: 343 EPNRYENRSASPHSTSGQFPGTSTRRSDPYDPPRSRNSSSISNRARSNVVEEDDELRSPT 402
Query: 511 ---KSTMTNEELYAVIHKSKKKLNIKDAPERAESPALSNISLS 630
++ T+++ A + K + K + A +N S S
Sbjct: 403 PLSRAPTTDDDSDAGSPEEKTHMERKSPDDVAPGNRRNNSSSS 445
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 29.9 bits (64), Expect = 1.6
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 13/155 (8%)
Frame = +1
Query: 40 ESHGVKDETPFRALIRKSLERL*LDYRHSSADKACLNIPHNLVQSEGPTVDMNAINPTLH 219
E V D P+ + SL RHS +D+ + ++ GPT + ++PT
Sbjct: 135 ERSTVADTKPYYSSATSSLSSTYDSRRHSRSDRISSSTLPDVKIETGPTTRTHMVHPTSS 194
Query: 220 KYNTAHLRGKHDVINY------DNSSKNQKEHQ-RFWTLPKRTAET----NQLRPT--SS 360
+ G+ + ++ + + + +K+ + W ++ ET L PT SS
Sbjct: 195 HIRSRSSYGRSNTVSMFAQQARERADREEKDRDYKEWMQKEKDRETELGLETLYPTTSSS 254
Query: 361 NLNQDPGQLSAGNSIKISPIDPRASRSFKSSTPSN 465
+ Q Q S+ SP + ++S+ S+
Sbjct: 255 SSAQSSAQSEFRRSVAPSPTSTSTTTPYRSNRYSS 289
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 400 SIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKS 558
++KI +DP+ R+ + EN+VD S VK N+EL+ +++S
Sbjct: 1277 AVKIPSVDPKELRNDVAGVLEESENLVD------SSVKENSANDELFDEVNRS 1323
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 390 RKLTWILVEIRGG-RS*LIRLSCSLWKSPESLMFLLVFRRVIVINDVM 250
RK T ++ E +GG + + +C W SP+ LM +L+ +V+ DV+
Sbjct: 849 RKFTGLVYEAQGGGKEPSVLKACKQWSSPQQLMPVLL---PLVVKDVL 893
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 346 RPTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKS-STPSNKENV 477
R ++N + D + SAG+ + SP++PR S F STP ++V
Sbjct: 83 RQDNNNDHLDTHRSSAGHELVDSPLEPRDSHDFLDLSTPQELQDV 127
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 349 PTSSNLNQDPGQLSAGNSIKISPIDPRASRSFKSS-TPSNKENVVDLSCKLLSPVKSTMT 525
P S+++ D + S N + I + S KS +P N +NV + S + P +
Sbjct: 385 PVSNSIKNDITKQSESNRADATNISFSSFESTKSDISPQNNQNVEETSTPTVPPNSTIQE 444
Query: 526 NEE 534
NEE
Sbjct: 445 NEE 447
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 442 FKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSK 561
F+ KENV D C P S +EL +I KSK
Sbjct: 36 FRFQEQLKKENVEDTICSETPPESSIPNRDELLELIRKSK 75
>AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical
protein T24E12.10 protein.
Length = 632
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +1
Query: 370 QDPGQLSAGNSIKISPIDPRASRSFKSSTPSNKENVVDLSCKLLSPVKSTMTNEELYAVI 549
Q+ Q S+ + +PI+ + + + E LS + ++PVK+ + N+E I
Sbjct: 529 QEDRQFSSSPASHDAPIEQQETSQSPENQYDIDEEAHHLSTQSVAPVKAFLANDETPHEI 588
Query: 550 HKSKKKLNIKDAPERAESPALSN 618
+ ++PE + SP + N
Sbjct: 589 SAEVHDNHQVESPEPSPSPDVQN 611
>AF016681-3|AAB66173.1| 159|Caenorhabditis elegans Hypothetical
protein F22E5.9 protein.
Length = 159
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 451 STPSNKENVVDLSCKLLSPVKSTMTNEELYAVIHKSKKKLNIKDAPERAESPALSNISLS 630
S + + V + + K+ + V + +LYA +K K ++KD + + N++LS
Sbjct: 23 SAEDSMKGVKNAASKMRAGVDEIVEKRKLYAESETAKLKKSLKDLSKENSDLKMQNLNLS 82
Query: 631 PVSSE 645
+S+
Sbjct: 83 AENSD 87
>AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 430 ASRSFKSSTPSNKENVVDLSCKLLSPVKS-TMTNEELYAVIHKSKKKLNIKDAPERAESP 606
A+ T +K ++ + SP+KS T+T + ++ SKK ++ P +
Sbjct: 204 AAEEVDFDTKESKSKIIPATTP--SPLKSGTVTGKPPVKIVETSKKSIDPNGLPIHKKLK 261
Query: 607 ALSNISLSPVSSET 648
+ ++ + P+S+E+
Sbjct: 262 PVEHLPIRPISTES 275
>AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 430 ASRSFKSSTPSNKENVVDLSCKLLSPVKS-TMTNEELYAVIHKSKKKLNIKDAPERAESP 606
A+ T +K ++ + SP+KS T+T + ++ SKK ++ P +
Sbjct: 312 AAEEVDFDTKESKSKIIPATTP--SPLKSGTVTGKPPVKIVETSKKSIDPNGLPIHKKLK 369
Query: 607 ALSNISLSPVSSET 648
+ ++ + P+S+E+
Sbjct: 370 PVEHLPIRPISTES 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.128 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,540,641
Number of Sequences: 27780
Number of extensions: 275395
Number of successful extensions: 654
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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