Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0321
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    26   0.16 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    26   0.16 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   0.84 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   0.84 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   3.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   3.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   3.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   3.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +3

Query: 273 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 389
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 332 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 373


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +3

Query: 273 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 389
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 374


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 324 TPPEDDPKQLFVAMTSDRGLCG 389
           TPPEDD + L  +++S   L G
Sbjct: 668 TPPEDDAESLNQSISSPGALSG 689


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 324 TPPEDDPKQLFVAMTSDRGLCG 389
           TPPEDD + L  +++S   L G
Sbjct: 560 TPPEDDAESLNQSISSPGALSG 581


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +3

Query: 273 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 389
           A PYG   +     ++  +  PP+D    L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDGAGNLISPSINDDGTCG 374


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 98  GCRHPSRGGGLPSAKQEYG 154
           GC  P +GG  P+ K +YG
Sbjct: 391 GCG-PGQGGLQPTIKSDYG 408


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -2

Query: 223 FMDCVIFWIFFTDLRRMEMAFKVAIFLF 140
           ++ C+ +W+     + ++   + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -2

Query: 223 FMDCVIFWIFFTDLRRMEMAFKVAIFLF 140
           ++ C+ +W+     + ++   + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 98  GCRHPSRGGGLPSAKQEYG 154
           GC  P +GG  P+ K +YG
Sbjct: 391 GCG-PGQGGLQPTIKSDYG 408


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 285 GEGAVQFYERAEVTPPEDDPKQLFVAMTSD 374
           GEGA     RA +   ED+  Q+ V M  +
Sbjct: 458 GEGAFGIVRRAFLDLKEDNKTQVAVKMLKE 487


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 105 RHPVRSVPTFCKFYGCLSVKF 43
           RH VRSV    + +G +++K+
Sbjct: 373 RHSVRSVFFLSEIFGLVNLKY 393


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 241 LAADTIFMDCVIFWIFFTDL 182
           LAA  IF D V++ +  +DL
Sbjct: 147 LAASVIFFDVVVWGLSASDL 166


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 292 VQYSSMKGLRLHLPKMTPSN 351
           +QYS ++G+RL L    PS+
Sbjct: 291 LQYSLVRGVRLLLEVDAPSH 310


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 377 SVRGHSNKQLLGVIFGRCNLS 315
           ++ GH    LL +IF +C L+
Sbjct: 79  AIYGHPLFPLLALIFEKCELA 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,096
Number of Sequences: 336
Number of extensions: 2532
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)