Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0320
(625 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1952.16 |rga9||RhoGAp, GTPase activator towards Rho/Rac/Cdc4... 31 0.10
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 31 0.14
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 31 0.14
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 31 0.14
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 31 0.14
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 31 0.14
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 31 0.14
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 31 0.14
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 31 0.14
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 31 0.14
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 31 0.14
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 31 0.14
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.24
SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces pom... 28 0.95
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 2.2
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 27 2.2
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 27 2.2
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 27 2.9
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 2.9
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 3.8
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 26 3.8
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 5.1
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 5.1
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 26 5.1
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 5.1
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 25 6.7
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 6.7
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 8.9
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 8.9
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 8.9
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 25 8.9
>SPAC1952.16 |rga9||RhoGAp, GTPase activator towards
Rho/Rac/Cdc42-like small GTPases|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 684
Score = 31.5 bits (68), Expect = 0.10
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 266 VFDRCQQMEAQRLKFFKDVLFSFHKCLNISQE--PSLPQIYEEFHHTINNADSQKDLKWW 439
VF +Q E RL K VL +C N S PSL I+ + ++ N DS +D+
Sbjct: 354 VFKDLEQAELDRLNAVKSVLV---ECSNYSGNFIPSLNSIFIDNLNSFKNLDSLRDMSTQ 410
Query: 440 ANNH 451
N H
Sbjct: 411 INKH 414
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQK 424
K L +K NI +EP LP IY+EF +++K
Sbjct: 356 KHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEK 392
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.24
Identities = 16/78 (20%), Positives = 33/78 (42%)
Frame = +2
Query: 53 EYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITA 232
+Y C++ Q + +++ VK+ R + + E+ E+YQ +L +
Sbjct: 418 KYEQTCQEVERLQRSYNHVMEEANLQHPLVKEQFKRFAHMQREIVAMSEQYQKSLEDCQK 477
Query: 233 YNPRYIEDMTSVFDRCQQ 286
RY + T D+C +
Sbjct: 478 AKSRYEQLETLFKDKCTE 495
>SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 0.95
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 26 LQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKN 193
+Q R R+EYH ++E+ A Q S + + ++ ++ +C+ E S N
Sbjct: 146 IQNDVRNRVEYHKILQEEQAADCQREYLSINCDSPGPAIFEVCQKLKQCKMESSNN 201
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 175 RRSVKEPRKIPDSSSRDHGVQPS 243
RRS + P KIP S+ +D VQ S
Sbjct: 182 RRSTELPSKIPSSTPKDDNVQES 204
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = -1
Query: 361 FLTYVEAFVEAKQHIFEEFQSL 296
++T+ + +EAK+HIF+EF+ +
Sbjct: 77 YVTHFTSRMEAKKHIFQEFEGV 98
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.2
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 359 EPSLPQIYEEFHHTINNADSQKDLKWWANN---HGVNMAMAWPQFEEYTEEFRDIAKGKS 529
+ SLP + + N + K K +NN G N+ + PQ + R K KS
Sbjct: 236 DKSLPSSEMDSNLQTNPSSISKGKKNNSNNTTQKGPNIISS-PQVINASSPVRKAGKKKS 294
Query: 530 KESLPTGPIT 559
K++LPT P++
Sbjct: 295 KKALPTSPLS 304
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 26.6 bits (56), Expect = 2.9
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 332 FHKCLNISQEPSLPQIYEEFHHTINNADSQKDLKWWANNHGVNMAMAWPQFEEYTEEFRD 511
F K L + QE I+ H +S K L+ + G + Q E+Y+ RD
Sbjct: 514 FDKVLKLIQEGHQVMIF--VHSRKETINSAKKLREQFFHEGEADLLDNSQHEKYSLAQRD 571
Query: 512 IAKGKSKE 535
++K K+KE
Sbjct: 572 VSKSKNKE 579
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 120 LSPLAFLS*FCAVLSCLQAVWYSSL 46
++P FC VL CL WY SL
Sbjct: 198 VAPFFVFQIFCCVLWCLDDYWYFSL 222
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 23 LLQKVERARLEYHTACKQERTAQNQ 97
LL V+RA++ YH AC +A+ +
Sbjct: 147 LLNSVKRAKVSYHEACDDLESARQK 171
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 83 TAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAE 223
T QE S S ++V++++D+V++ +KN ++ T L++
Sbjct: 3 TTLGQESKTDWASLDSDEEVQRISDKVNQLNTSENKNEDQKATNLSD 49
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 467 MAWPQFEEYTEEFRDIAKGKSKESLPTGPITLLNQRPVSEDELP 598
M W E+ EEF + ++ P+ P+ LL ++ LP
Sbjct: 295 MKWSIVPEFREEFIAKTRKTPRKRSPSSPVPLLAKKREGSPSLP 338
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 212 ALAEITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLN 349
A+ EI+ +N +E + D C++M+ F + +FS HK L+
Sbjct: 1144 AIPEISRFNLEQLEQDCN--DICERMKNVEKDFSNEGIFSNHKALH 1187
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 302 LKFFKDVLFSFHKCLNISQEPSLPQIYEEFHHTINNAD 415
L F D L HK LN S E + + + +NAD
Sbjct: 426 LSTFSDTLIHLHKMLNSSPEETYISNLHDSYTAFSNAD 463
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 187 KEPRKIPDSSSRDHGVQPSIHRGHDFSIR*VPT 285
++P R H V PS HR D ++ P+
Sbjct: 641 RKPEAFKTKGDRPHKVHPSFHRNSDSKLKLEPS 673
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 473 WPQFEEYTEEFRDIAKGKSKESLPTGPITLLNQRP 577
W Q E Y + + +G S+E+L LL RP
Sbjct: 556 WVQRENYEKALETLNEGVSQETLIQHATALLTHRP 590
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 92 SALFFLVCKPCGT-LAWRVQPSE 27
S LF ++CK C T L RV PS+
Sbjct: 992 SFLFLMLCKQCKTVLCCRVSPSQ 1014
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.9
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 329 SFHKCLNISQEPSLPQIYEEFHHTINNADSQKDLKWWANN-HGVNMAMAWPQFEEYTEEF 505
+F + I + LP++ + NA ++ +K + + HGV +PQ E +
Sbjct: 307 AFLRSSTIRHKLGLPEVPSAM--PVPNAQNESFVKSFTDIVHGVQEKGKYPQASEILDAT 364
Query: 506 RDIAKGKSKESLPTGPITLLNQRPVSED 589
R + + E PT T+ +S++
Sbjct: 365 RFLKTDTNNEQKPTNNSTITKATTLSDN 392
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 8.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 17 SKLLQKVERARLEYHTACKQERTAQNQ 97
+++++K+ER R H A +R QNQ
Sbjct: 9 TEVVRKIERERSVIHGALSMKRLTQNQ 35
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.0 bits (52), Expect = 8.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 613 VIRYWR*LILADWPLIEQRNR 551
V+++W L++ DW E R+R
Sbjct: 759 VVKFWDGLMMGDWLATEMRSR 779
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 8.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 423 FWLSALLIVWWNS 385
FWL+ L+ WWN+
Sbjct: 5 FWLAILVFRWWNA 17
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,451,554
Number of Sequences: 5004
Number of extensions: 49477
Number of successful extensions: 205
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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