Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0320
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371... 32 0.32
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 31 0.56
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 31 0.98
02_05_1127 + 34292894-34293284,34293948-34295443 30 1.3
05_06_0136 + 25928152-25928659,25928767-25928899,25928987-259290... 29 3.0
12_02_0058 + 13015401-13016654 28 6.9
09_06_0234 - 21747724-21747839,21748027-21748096,21749157-217492... 28 6.9
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 28 6.9
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 28 6.9
10_08_0791 - 20590744-20591211,20591379-20591439,20591525-205915... 27 9.2
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 9.2
05_01_0170 + 1180168-1180367,1181538-1181598,1181657-1181659,118... 27 9.2
03_06_0055 + 31317515-31317724,31317829-31318029,31318178-313183... 27 9.2
01_03_0038 + 11862743-11862884,11863145-11863704,11863733-118637... 27 9.2
>08_01_0418 -
3716226-3716279,3716531-3716581,3716656-3716751,
3717037-3717194,3717303-3717417,3717511-3717564,
3717843-3717950,3718494-3718583,3718818-3718856,
3718993-3719172,3719264-3719576,3719659-3719834
Length = 477
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +2
Query: 17 SKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNR 196
SKLL K+ + + A ++++TA+ + +NA ++ S + + SK +++SK+
Sbjct: 252 SKLLPKIVESPEKLQRALEEKKTARAELKNAEKIATQSVQEKTATLEIYSKGYEKLSKHS 311
Query: 197 EKYQTALAEITA 232
K Q ++TA
Sbjct: 312 TKIQALQEQVTA 323
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +2
Query: 17 SKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNR 196
SKLL K+ ++ + A ++++TA+ + +NA + S + + SK +++SK+
Sbjct: 239 SKLLSKIVQSPEKLQRALEEKKTARAELKNAEKIAMQSVQEKTATLEIYSKGYEKLSKHS 298
Query: 197 EKYQTALAEITA 232
K Q + TA
Sbjct: 299 SKIQALQEQFTA 310
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 30.7 bits (66), Expect = 0.98
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 5 QKPWSKLLQKVERARLEYHTACKQERTAQNQERNA--SGDSSFSPDQVKKMADRVSKCRD 178
++ K K+ER RL+ KQ++ Q ++R+A + ++ +K R KC +
Sbjct: 1345 EREMRKAAAKLERERLKQEKELKQKQEEQKKKRDADVAAKKRQRGEEERKEKQRKRKCTE 1404
Query: 179 EVSKNREK 202
E K +++
Sbjct: 1405 EARKQQKQ 1412
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 521 PWRCPGTPRCTPRTAARPSPY*PRGCW 441
P R PG PR PR R P PR W
Sbjct: 44 PSRAPGRPRHPPRPTRRAHPASPRASW 70
>05_06_0136 +
25928152-25928659,25928767-25928899,25928987-25929058,
25929150-25929221,25929507-25929670,25929760-25930025,
25930115-25930241,25930599-25930667,25930765-25930957,
25931053-25931299,25931342-25931470,25932367-25932654
Length = 755
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/78 (19%), Positives = 31/78 (39%)
Frame = +2
Query: 254 DMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQKDLK 433
D+ + +C + R DV+ +CL + +E +T NN+
Sbjct: 660 DVADIAFKCTAQVSARRPTMTDVVAQLQECLELEEEHCAVNDANNNFYTSNNSKPNSSYD 719
Query: 434 WWANNHGVNMAMAWPQFE 487
+A +H ++++ FE
Sbjct: 720 TYAADHSIDVSQNSVAFE 737
>12_02_0058 + 13015401-13016654
Length = 417
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 512 CPGTPRCTPRTAARPSPY*PRGCWPT 435
C PRC PR A P + P +PT
Sbjct: 244 CVAAPRCAPRVVAPPPRHPPIQTYPT 269
>09_06_0234 -
21747724-21747839,21748027-21748096,21749157-21749294,
21749389-21749493,21750157-21750527,21750612-21750694,
21750803-21751063,21751425-21751606,21752539-21752649,
21752727-21752798,21752883-21753036,21753329-21753341,
21754015-21754084,21754409-21754485,21754582-21754640,
21755327-21755580
Length = 711
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 413 DSQKDLKWWANNHGVNMAMAW 475
DS+++ K+W+N+ G+ +A W
Sbjct: 449 DSEQEHKFWSNSPGIGIAQLW 469
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2
Query: 20 KLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNRE 199
+LL+ + YHT QE +E FS DQ++ V++ +VS ++
Sbjct: 1634 QLLEVRKELNDAYHTIANQEEQVSVREIKWDAYKKFSEDQLEAEQQHVAELEVQVSSLKQ 1693
Query: 200 KYQ 208
+ Q
Sbjct: 1694 QLQ 1696
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 2 AQKPWSKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMAD---RVSKC 172
A+ +L ++E AR+E H K NQ++N S D D R+
Sbjct: 2246 AESSAKQLSVELENARMEIHNLEKHSEMLLNQKKNLETQVSELKDMEAVAHDQHGRIKDL 2305
Query: 173 RDEVSKNREKYQ 208
DE+SK ++ +
Sbjct: 2306 SDELSKKDQEIE 2317
>10_08_0791 -
20590744-20591211,20591379-20591439,20591525-20591592,
20592015-20592188,20592291-20592331,20592571-20592620,
20593083-20593171,20593250-20593324,20593631-20593719,
20593895-20593955,20594111-20594227,20594465-20594667,
20594785-20594842,20594951-20595103
Length = 568
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 585 SLTGR*LSNVIGPVGRLSLDLPLAMSRNSS 496
S+TGR +S + PVG LP ++ R+SS
Sbjct: 83 SVTGRYISRICIPVGAADTMLPCSLRRSSS 112
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.5 bits (58), Expect = 9.2
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Frame = +2
Query: 20 KLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKN-R 196
+LLQ R R E+ + T + +R S +VK++ K ++E K R
Sbjct: 810 QLLQLQRRVRSEFLQDFFKPNTT-DLDRIKSVKKHRHGRRVKQLEKIEQKMKEERQKRIR 868
Query: 197 EKYQTALAEITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQ 376
E+ + A+I A+ + +ED V + +RLK F + FHK L +
Sbjct: 869 ERQKEFFADIEAHREK-LEDSFKV-------KRERLKGFNRYVKEFHKRKERIHREKLDR 920
Query: 377 IYEEFHHTINNADSQKDLK 433
I E + + N D + L+
Sbjct: 921 IQREKINLLKNNDVEGYLR 939
>05_01_0170 +
1180168-1180367,1181538-1181598,1181657-1181659,
1182396-1182443,1182979-1184595
Length = 642
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +2
Query: 110 SGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAE 223
SG+++ P ++ ++ RVS+ +DE+ K +E Q +L+E
Sbjct: 100 SGNTTKRPSRLSELESRVSQLQDELKKAKE--QLSLSE 135
>03_06_0055 +
31317515-31317724,31317829-31318029,31318178-31318343,
31319417-31319814
Length = 324
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 62 CGTLAWRVQPSEVISTMVSG 3
CGT A R+QPS V TM +G
Sbjct: 202 CGTFASRIQPSAVDPTMDAG 221
>01_03_0038 +
11862743-11862884,11863145-11863704,11863733-11863777,
11864174-11864563
Length = 378
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 89 QNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITAYNPRYIEDMTSV 268
+ + NAS S+ + K MA V+ + + + K+QTA A + RY++D ++
Sbjct: 72 KTNDTNASEIKSWKINDGKVMAAIVNSVKHSLIVSLSKFQTAKAIWGSLKQRYVQDSGAL 131
Query: 269 FDRCQQ 286
Q
Sbjct: 132 LHTLMQ 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,613,294
Number of Sequences: 37544
Number of extensions: 345732
Number of successful extensions: 1138
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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