Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0320
(625 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15160.1 68418.m01776 bHLH family protein 30 1.4
At3g14180.1 68416.m01792 expressed protein similar to 6b-interac... 30 1.4
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 1.4
At4g26940.2 68417.m03877 galactosyltransferase family protein co... 29 2.5
At4g26940.1 68417.m03876 galactosyltransferase family protein co... 29 2.5
At2g42380.2 68415.m05245 bZIP transcription factor family protein 29 2.5
At2g42380.1 68415.m05244 bZIP transcription factor family protein 29 3.3
At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 28 4.4
At3g01300.1 68416.m00039 protein kinase, putative similar to pro... 28 4.4
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 28 5.8
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 28 5.8
At1g50030.1 68414.m05614 target of rapamycin protein (TOR) ident... 28 5.8
At1g08840.1 68414.m00984 DNA replication helicase, putative simi... 28 5.8
At5g28350.2 68418.m03443 expressed protein 27 7.7
At5g28350.1 68418.m03442 expressed protein 27 7.7
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 27 7.7
At4g37740.1 68417.m05343 expressed protein identical to transcri... 27 7.7
At3g61480.1 68416.m06885 expressed protein 27 7.7
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 27 7.7
At3g01920.1 68416.m00141 yrdC family protein contains Pfam PF013... 27 7.7
At2g38100.1 68415.m04677 proton-dependent oligopeptide transport... 27 7.7
At1g52615.1 68414.m05940 hypothetical protein 27 7.7
>At5g15160.1 68418.m01776 bHLH family protein
Length = 94
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = +2
Query: 83 TAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITAYNPRYIEDMT 262
++ + R AS S S DQ+ + ++ + E+ +NR + +++ YI ++
Sbjct: 2 SSSRRSRQASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLN 61
Query: 263 SVFDRCQQMEAQRLK 307
D Q L+
Sbjct: 62 KEADDLSDRLTQLLE 76
>At3g14180.1 68416.m01792 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 443
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/101 (21%), Positives = 41/101 (40%)
Frame = +2
Query: 20 KLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNRE 199
K + +R R A + ++ + SGDS P K+M K +D
Sbjct: 290 KRCSESKRWRFRKRNASDSDSESEAAMSDDSGDSLPPPPLSKRMKTEEKKKQDGDGVGN- 348
Query: 200 KYQTALAEITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDV 322
K++ I + Y + + + +ME +R+KF K++
Sbjct: 349 KWRELTRAIMRFGEAYEQTENAKLQQVVEMEKERMKFLKEL 389
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 29.9 bits (64), Expect = 1.4
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Frame = +2
Query: 53 EYHTACKQERTAQNQERNASGDSS--------FSPDQ-VKKMADRVSKCR--DEVSKN-R 196
++H A K++R N+ + + DSS +PD +KK + +C+ D V +
Sbjct: 886 DHHRASKRQRI--NELESLTHDSSETVHQREAIAPDNGLKKDGECHEECKTLDIVCDTLK 943
Query: 197 EKYQTAL-AEITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLP 373
KY +A ++++A + + V + M QR ++ D L + + S E +
Sbjct: 944 VKYLSAFNSKLSAAQHEFKKSYNQVSESLSNMGKQRSVWWLDALQLTEQNKDFSSELTR- 1002
Query: 374 QIYEEFHHTINNADSQKDLKWWANNHGVNM 463
+I E H +NN+ S ++ + HG+ +
Sbjct: 1003 KIEEALHGNLNNSSSSRESSRFRTIHGMKL 1032
>At4g26940.2 68417.m03877 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 306
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 38 ERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTAL 217
ER RLE ++ + + ++ GD SPD ++ + +SK E++ R ++ +
Sbjct: 60 ERLRLESEDCDSSKKGLKRESKDILGDVYKSPDAIQTLDKTISKLETELADARAAQESIM 119
>At4g26940.1 68417.m03876 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 407
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 38 ERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTAL 217
ER RLE ++ + + ++ GD SPD ++ + +SK E++ R ++ +
Sbjct: 60 ERLRLESEDCDSSKKGLKRESKDILGDVYKSPDAIQTLDKTISKLETELADARAAQESIM 119
>At2g42380.2 68415.m05245 bZIP transcription factor family protein
Length = 321
Score = 29.1 bits (62), Expect = 2.5
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Frame = +2
Query: 53 EYHTACKQERTAQNQERNASGDSS----FSPDQVKK-MADRVSKCRDEVSK-----NREK 202
E + CK E N SGDSS P +VK+ +A+R S R V K E+
Sbjct: 157 EVQSQCKMEPEDGTASNNNSGDSSGNRILDPKRVKRILANRQSAQRSRVRKLQYISELER 216
Query: 203 YQTAL-AEITAYNPR 244
T+L AE++ +PR
Sbjct: 217 SVTSLQAEVSVLSPR 231
>At2g42380.1 68415.m05244 bZIP transcription factor family protein
Length = 310
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 53 EYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITA 232
E + CK E N SGDSS + K R+ R ++R + ++E+
Sbjct: 157 EVQSQCKMEPEDGTASNNNSGDSSGNRILDPKRVKRILANRQSAQRSRVRKLQYISELEL 216
Query: 233 YNPR 244
+PR
Sbjct: 217 LSPR 220
>At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein
kinase, putative and genscan+
Length = 668
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 224 ITAYNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQI 379
+T Y +E + V C +++ + K V+ + +NISQE + P++
Sbjct: 601 LTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEVINISQEQATPRL 652
>At3g01300.1 68416.m00039 protein kinase, putative similar to
protein kinase APK1A [Arabidopsis thaliana]
Swiss-Prot:Q06548
Length = 490
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 116 DSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITAYNPRYIEDMTSVFDRCQQMEA 295
+ FS +K+ ++C SK R K + + E+ P +++DM S Q M+A
Sbjct: 380 EGHFSVKGAQKVTQLAAQCLSRDSKIRPK-MSEVVEVLKPLP-HLKDMASASYYFQTMQA 437
Query: 296 QRLK 307
+RLK
Sbjct: 438 ERLK 441
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 148 NGRSCIEMSRRSVKEPRKIPDSSSRDHGVQPSIHRGHDFSI 270
NG + S R+V I SS HG P+I +GH S+
Sbjct: 176 NGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESV 216
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 148 NGRSCIEMSRRSVKEPRKIPDSSSRDHGVQPSIHRGHDFSI 270
NG + S R+V I SS HG P+I +GH S+
Sbjct: 176 NGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESV 216
>At1g50030.1 68414.m05614 target of rapamycin protein (TOR) identical
to pTOR [Arabidopsis thaliana] GI:12002902; contains Pfam
profiles PF00454 Phosphatidylinositol 3- and 4-kinase,
PF02259 FAT domain, PF02260 FATC domain
Length = 2481
Score = 27.9 bits (59), Expect = 5.8
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +2
Query: 290 EAQRLKFFKDVLFSF---HKCLNISQEPSLPQIYEEFHHTINNADSQ-KDLKWWANNHGV 457
+A L + K V+ S K + + P LP++ E HT+ +D KD W G
Sbjct: 881 DASLLSYHKRVVRSLMIIFKSMGLGCVPYLPKVLPELFHTVRTSDENLKDFITW--GLGT 938
Query: 458 NMAMAWPQFEEYTEEFRD-IAKGKSKESLPTGPITLLNQRPV 580
+++ +Y E +++ S +LP GPI PV
Sbjct: 939 LVSIVRQHIRKYLPELLSLVSELWSSFTLP-GPIRPSRGLPV 979
>At1g08840.1 68414.m00984 DNA replication helicase, putative similar
to helicase [Xenopus laevis] gi|18845092|gb|AAL79550
Length = 1296
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 83 TAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTAL 217
TA +N G S+ PD+ K M ++++ ++SKN +++ +
Sbjct: 68 TAVLTPQNPLGTSNEKPDESKDMDQQLTEASPKISKNLKRFSPGM 112
>At5g28350.2 68418.m03443 expressed protein
Length = 1087
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 191 SLTLRRDISIHDLPFS*LDLD*KSCLRWRFFPDSALFFLVCKPCGTLAWRVQPSEVISTM 12
S++L R +S+HD +S + + W PD++ F + K G W V ++ST+
Sbjct: 247 SISLLRTVSLHDWGYSADYTGPVNNIAWT--PDNSAFAVGWKSRGLAVWSVSGCRLMSTV 304
>At5g28350.1 68418.m03442 expressed protein
Length = 1127
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 191 SLTLRRDISIHDLPFS*LDLD*KSCLRWRFFPDSALFFLVCKPCGTLAWRVQPSEVISTM 12
S++L R +S+HD +S + + W PD++ F + K G W V ++ST+
Sbjct: 287 SISLLRTVSLHDWGYSADYTGPVNNIAWT--PDNSAFAVGWKSRGLAVWSVSGCRLMSTV 344
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 35 VERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKM 151
+ + R E +TA Q + N + SFSP ++KK+
Sbjct: 803 IAKIRQEINTALFQRSKVDDDASNNNDSDSFSPQELKKL 841
>At4g37740.1 68417.m05343 expressed protein identical to
transcription activator GRL2 [Arabidopsis thaliana]
GI:21539882 (unpublished); supporting cDNA
gi|21539881|gb|AY102635.1|
Length = 535
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 540 RLSLDLPLAMSRNSSVYSSNCGQAIAILTPWLLAHHL 430
+LS+ +P+A S SS +++N Q L+P L+ L
Sbjct: 411 QLSMSIPIASSSPSSTHNNNNAQEKTTLSPLRLSREL 447
>At3g61480.1 68416.m06885 expressed protein
Length = 1091
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 191 SLTLRRDISIHDLPFS*LDLD*KSCLRWRFFPDSALFFLVCKPCGTLAWRVQPSEVISTM 12
S++L R +S+HD +S + + W PD++ F + K G W V ++ST+
Sbjct: 241 SISLLRTVSLHDWGYSADYTGPVNNIAWT--PDNSAFAVGWKSRGLAVWSVSGCRLMSTV 298
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 9 NHGRNYFRRLNAPG*STTRLANKKEQRRIRKETPAETALLVQIKSRKWQIVYRNVATKCQ 188
N G + F +N PG ++ KK++R + + L Q K+R + YR V C
Sbjct: 34 NSGSSIFLYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLSAQTKAR-FSEAYR-VPDTCD 91
Query: 189 RTEKNT 206
T+ +T
Sbjct: 92 MTKLST 97
>At3g01920.1 68416.m00141 yrdC family protein contains Pfam PF01300:
yrdC domain; similar to Protein yciO.
(Swiss-Prot:P45847) [Shigella flexneri]; similar to
Chain A, Crystal Structure Of E. Coli Ycio Length
(GI:27573707) [Escherichia coli]
Length = 307
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 107 RFFPDSALFFLVCKPCGTLAWRVQP 33
RF + L ++ PCG +W++QP
Sbjct: 61 RFTKEGELVYIEVDPCGVDSWKLQP 85
>At2g38100.1 68415.m04677 proton-dependent oligopeptide transport
(POT) family protein low similarity to SP|P46032 Peptide
transporter PTR2-B (Histidine transporting protein)
{Arabidopsis thaliana}; contains Pfam profile PF00854:
POT family
Length = 521
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -1
Query: 199 FSVL*HFVATFRYTICHFLD 140
F++L +F+ T+RYT+C+ D
Sbjct: 488 FNLLLYFIVTYRYTVCNKKD 507
>At1g52615.1 68414.m05940 hypothetical protein
Length = 318
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 98 ERNASGDSSFSPDQVKKMADRVSKCRDEVS 187
E N++ ++ +P + M DR+SK DE+S
Sbjct: 134 ESNSNNSTTAAPPPHRNMPDRISKFLDEIS 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,091,025
Number of Sequences: 28952
Number of extensions: 267413
Number of successful extensions: 993
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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