Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0317
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 32 0.071
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 30 0.29
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 30 0.29
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 30 0.38
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 29 0.50
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 29 0.87
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 28 1.2
SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 28 1.5
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 27 2.0
SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 27 3.5
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 4.7
SPCC1840.01c |mog1|SPCC790.04c|Ran GTPase binding protein Mog1 |... 26 4.7
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 26 4.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 26 4.7
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 4.7
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 6.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 6.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.1
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 8.1
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 25 8.1
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 8.1
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 32.3 bits (70), Expect = 0.071
Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 1/179 (0%)
Frame = +2
Query: 29 PNAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNAYSP-EKADDTLHERSPAYTFRP 205
P PS + AP+ +PN P N Y+P A T+ +PA+T++P
Sbjct: 946 PPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTV---NPAHTYKP 1002
Query: 206 KIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKADKV 385
+ S P P++ N V P+ S R + PSP+A +P ++
Sbjct: 1003 ----HGGSQIVPP----PKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQL 1054
Query: 386 LLDSAPRYSFRIKTNTHKPDDVPAPNTYSPDKADKVLLNSAPQYTFRIKTDTLKTINTP 562
P S R+ + +P P S ++ P T ++ T + + P
Sbjct: 1055 -----PPVSSRLPPVSATRPQIPQPPPVSTALPSSSAVSRPPIATSAGRSSTAASTSAP 1108
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 30.3 bits (65), Expect = 0.29
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 224 FSNTPAPNYYNPEKSENL-VHEHSPSYSFRPKFTD-EKVFETPSPNAYNPEKADKVLLD- 394
+S+ P P YYNP + +N + P+Y R + + PS + N D+V+++
Sbjct: 650 YSDAPYPGYYNPAQFQNAPTNFPMPTYGGRTQDQSYPRQNGYPSYSDGNVYPHDRVMINY 709
Query: 395 --SAPRYSFRIKTNTHKPDDVPAPNTYSP 475
S P + NT+ P P +Y P
Sbjct: 710 GSSMPTANGFYVPNTYSPVPFPYNTSYPP 738
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 30.3 bits (65), Expect = 0.29
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Frame = +2
Query: 161 DDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRP-KFTDEKVF 337
D T P+YT + K + Y + E+ E +VH + + F +
Sbjct: 352 DSTQASLMPSYTRKTSNASKKLTTEEDEFYDSEEEPEAIVHRDTSALERTVLNFINSSTA 411
Query: 338 ETPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHKPDDVPA 457
+ S A P K+LL+ P + PDDVP+
Sbjct: 412 KELSDTASCPLSHSKLLLEHRPFQTLAEACIIKHPDDVPS 451
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 29.9 bits (64), Expect = 0.38
Identities = 26/68 (38%), Positives = 31/68 (45%)
Frame = +2
Query: 221 KFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKADKVLLDSA 400
KF + P P K+EN E +P+ K DEK P P A P K K L SA
Sbjct: 206 KFIDQPLPII----KAEN--KEAAPAKKAEKK-KDEKKKNAPKPQAEAPAKPPKHPLASA 258
Query: 401 PRYSFRIK 424
P SF I+
Sbjct: 259 PNGSFDIE 266
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 29.5 bits (63), Expect = 0.50
Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Frame = +2
Query: 74 APKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNY- 250
APK F + T SP K + H P + F PK + P +
Sbjct: 441 APKSQFSSSPTKESTTRKSEVEPPSPSKEIKSSHFSVPEFKFEPKTEATTDKKLNVPKFE 500
Query: 251 YNP----EKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNP 367
+ P + N + E+ P +F + K ETPS P
Sbjct: 501 FKPTATADVQTNRLKENEPKPTFFAQL-PSKTQETPSITENKP 542
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 28.7 bits (61), Expect = 0.87
Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 6/198 (3%)
Frame = +2
Query: 44 PSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNK 223
P + LD P++ G + + P+ N+ EKA T +P PK+ D+
Sbjct: 98 PGSNNLFLD--PRHQLGDNSQNAQRHHEPSFNS---EKASYT---STPYKNVAPKVIDSP 149
Query: 224 -----FSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKADKVL 388
SN+P+ + P +S ++ SP R + + P +N + +
Sbjct: 150 SARHMHSNSPS---FPPSQSHTSSYDQSPKGQLRDNISVPNQQDGLDPEVFNQQSKET-- 204
Query: 389 LDSAPRYSFRIKTNTHKPDDVPAPNTYSPDKADKVLLNSAPQYTFRIKTDTLKTIN-TPA 565
+ S ++ + + P V PN Y+P+ + L + PQ F + ++
Sbjct: 205 -----KKSLQVPPSRNVPPPVTRPNQYNPE-PNFSLSSGYPQQHFSQPELQNRNVHLETV 258
Query: 566 PNAYNLPNPVETPLYTIT 619
P +Y +P P PL + T
Sbjct: 259 PESYPVP-PSGYPLTSST 275
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 5 EELEDNPAPNAYDPSKY 55
EE+E+NPAP YD K+
Sbjct: 371 EEMEENPAPTIYDDYKF 387
>SPAPB1A10.11c |||glutamyl-tRNA synthetase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 126 IQHRMHIV--LKKLMTLFTKG--LLHIHSVQKSMITSFQILPHQITTILKKART*YTNTH 293
+++++H + +K++ F + L I S+ S+IT + LP +TTIL K T NTH
Sbjct: 397 LKNKVHTIKEFEKIVFYFYEASDLQQIRSLVSSLIT-VEELPKILTTILNKFETIEWNTH 455
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 77 PKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYN 256
P SFG +R + + ++P SP K + R P+ T+ PK NY+
Sbjct: 225 PPSSFGSQRQFNASQDSPKR---SPSKGSWSSILRRPSLTYSPKRQSTGLHRRSLTNYFK 281
Query: 257 -PEKS--ENLVHEHSPSYSFRP 313
P ++ ++ H+PS +P
Sbjct: 282 FPHRNAHQHNAIAHNPSVFGKP 303
>SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr
3|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 3.5
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -1
Query: 220 VIIDFWTECICRRPFVKSV---ISFFRTICIRCWIV--GGFICRSFYTKTVFRSPVQHII 56
VI+ F+T +C P KS+ ++F TI I C IV F +T+ V + +I
Sbjct: 96 VIVVFFTAWVCVNPLEKSIFGKVAFSVTIGITCPIVFIAIFCFFETWTQAVAQCIKVTVI 155
Query: 55 IFARIVSV 32
A+ V V
Sbjct: 156 FLAQCVKV 163
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 104 PADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVH 283
P +K PN+ + N + K+ + R+P T+ N + P N E + N++
Sbjct: 598 PFNKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVVN-EHALNIMS 656
Query: 284 EHSPSYSFRPKFTDEKVFETPSPN-AYNPEKADKV 385
E + + + T E E S N ++P K +
Sbjct: 657 EKLQRTNLKEQ-TPEMDIENSSQNLPFSPMKISPI 690
>SPCC1840.01c |mog1|SPCC790.04c|Ran GTPase binding protein Mog1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 190
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 470 SPDKADKVLLNSAPQYTFRIKTDTLKTINTPAPNAYNLPNPVE 598
+P+ A V + +TD + ++N P PN ++P+ VE
Sbjct: 115 NPESATNVAIFVNVITLIDFQTDIVISVNAPLPNTSSVPSSVE 157
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 26.2 bits (55), Expect = 4.7
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +2
Query: 146 SPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPN--YYNPEKSENLVHEHSPSYSFRPKF 319
SP K D +H++S Y+ +N N + Y N + +++ S S+S
Sbjct: 1091 SPAK-DYDIHDQS--YSVHELHSENMRENVGQSSLIYNNRDYMNTPMNDFSLSFSEIKGG 1147
Query: 320 TDEKVFETPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHK 439
E E+P +P AD+ +L P Y K+ ++K
Sbjct: 1148 ILESPVESPMTGTISPIDADESVLHDIPAYESLNKSESNK 1187
Score = 25.4 bits (53), Expect = 8.1
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 5 EELEDNPAPNAYDPSKYDYMLDGAPKYSFG---IKRPADKTP-NNPAPNAYSPEKADDTL 172
E + +N ++ + DYM +S IK ++P +P SP AD+++
Sbjct: 1111 ENMRENVGQSSLIYNNRDYMNTPMNDFSLSFSEIKGGILESPVESPMTGTISPIDADESV 1170
Query: 173 HERSPAYTFRPKIDDNKF 226
PAY K + NK+
Sbjct: 1171 LHDIPAYESLNKSESNKY 1188
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/89 (22%), Positives = 30/89 (33%)
Frame = +2
Query: 20 NPAPNAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTF 199
N AP+A + D L A ++ NP P A +TL R
Sbjct: 389 NTAPDALSSPRNDSPLTSAADEQMKHLSLQEEPKQNPTPAAPGAFPNSNTLPPRYNELGS 448
Query: 200 RPKIDDNKFSNTPAPNYYNPEKSENLVHE 286
P + F+ PN P + + + E
Sbjct: 449 LPSPNSVSFTEDSRPNVNTPSRRQQIQEE 477
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.2 bits (55), Expect = 4.7
Identities = 24/93 (25%), Positives = 36/93 (38%)
Frame = +2
Query: 74 APKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYY 253
APK+ G A TPN P A + KA L E++ ++ K +T A
Sbjct: 489 APKFQGGRSSTAPSTPNKVLPAASA--KAAPKLQEKAASFDIPNKSTIISTKSTVASPIK 546
Query: 254 NPEKSENLVHEHSPSYSFRPKFTDEKVFETPSP 352
E S L + S+ F + + + P P
Sbjct: 547 ANENSPAL--KSKASFEFPKELDPDGTWNAPIP 577
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 137 NAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPK 316
NAYS +A DTLH R + D S P YN + + L + +F
Sbjct: 22 NAYSHRRAGDTLHHR---HKHEKHNDLTDSSYEPLTLSYNDTQIQQLQRRDTVQCAF--P 76
Query: 317 FTDEKVFETP 346
+ D+ V TP
Sbjct: 77 YGDKMVAVTP 86
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 113 KTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFS-NTPAPNYYNPEKSEN 274
K P + P+ SP+ D R + +FR KI FS + ++ N K N
Sbjct: 463 KQPISSKPSTSSPDMTDAATGGRVSSSSFRDKILQTNFSPRSTIDSFSNISKKRN 517
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 6.1
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +2
Query: 311 PKFTDEKVFETPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHK-PDDVPAPNT-YSPDKA 484
P F+ + + TP+P+ A + + AP + KT HK P + + +T P+K+
Sbjct: 10 PNFSYDSILSTPTPS------ARRTIGPRAP----KSKTTYHKPPSSIESVSTLIQPNKS 59
Query: 485 DKVLLNSAPQYTFRIKTDTLKTINTPAPNAYNLPNPVETPLYTITGRHK 631
V Q+TF K + N A LP P +TP + R K
Sbjct: 60 QSVTSPYVKQFTFSSK--EYNSHNKHALQNSQLPLP-KTPEKSTVHRPK 105
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 260 QDCSNLVREYLKTCYHRFLDGMYMQETFREECHQLFQDYMHSVLDC 123
Q SN V+ L + R +++Q+ + C LF+D + S+ DC
Sbjct: 287 QQLSNAVKAIL---HLRSSQNLHVQDALFDFCFILFRDCLDSLKDC 329
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 17 DNPAPNAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNA 142
D P+ +D D + +G P Y FG +TP P++
Sbjct: 562 DGIQPHGFDSDGSDNVDEGIPPYGFGDSDSPKQTPLLTPPSS 603
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 8.1
Identities = 25/107 (23%), Positives = 47/107 (43%)
Frame = +2
Query: 32 NAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKI 211
N+ PS Y A K + I A K P +P N + +K D+ + + R K+
Sbjct: 25 NSRTPS-YSLPAPVAQKKNAQIPLKASK-PEDPFANLFQ-KKTDNKISLKELE---RQKV 78
Query: 212 DDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSP 352
++TP + Y+P ++ ++H+ S + + +K+ E P
Sbjct: 79 GTPDSNSTPKSSNYDPFENLEILHQLSNTPRDKDAVIHDKIEENKRP 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,198,296
Number of Sequences: 5004
Number of extensions: 80747
Number of successful extensions: 265
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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