Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0317
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 47 2e-05
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 38 0.008
01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38... 36 0.032
07_03_1160 - 24430240-24431268 36 0.042
11_06_0610 - 25449085-25453284 32 0.39
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 32 0.52
05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-22... 32 0.52
01_06_1608 - 38612754-38616947,38617030-38617095 32 0.52
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 31 0.91
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 30 2.1
08_01_0304 - 2502760-2502774,2502844-2502921,2503035-2503103,250... 29 3.7
04_03_0772 - 19438910-19439209,19439692-19439828,19441334-194415... 29 3.7
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 29 4.8
06_01_0892 - 6827510-6827590,6829348-6830412 29 4.8
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 29 4.8
02_05_0971 - 33188816-33188965,33190406-33190705,33191500-331915... 29 4.8
08_02_0172 - 13733527-13733614,13733700-13733749,13733823-137339... 28 6.4
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 28 8.5
01_07_0334 - 42818738-42818879,42818987-42819120,42819220-428193... 28 8.5
>04_03_0904 + 20717005-20718087
Length = 360
Score = 46.8 bits (106), Expect = 2e-05
Identities = 63/234 (26%), Positives = 83/234 (35%), Gaps = 13/234 (5%)
Frame = +2
Query: 23 PAPNAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNPAPNAYSPEKADDTLHERSPAYTFR 202
P P A+ P+ Y P P K P P Y+P T ++ P T
Sbjct: 100 PTPPAHTPTPPTYTPTPTPPKP---TPPTYKPQPKPTPAPYTPTPTPPT-YKPQPKPTPP 155
Query: 203 PKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPE---- 370
P K P P Y P + PSY +PK T TP+P +Y P+
Sbjct: 156 PTY---KPQPKPTPTPYTPTPTP-------PSYKPQPKPTPTPYTPTPTPPSYKPQPKPT 205
Query: 371 KADKVLLDSAPRYSFRIKTN---THKPDDVP-APNTYSP-DKADKVLLNSAPQYTFRIKT 535
+ P Y + K N T+KP P P TY P K P T++ +
Sbjct: 206 PTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQP 265
Query: 536 DTLKTINTPAPNAYNLPNPVETPL-YTITGRHKDPIDERLK---VPAPGTYNPE 685
T TP P P P TP YT T + P + + P P Y P+
Sbjct: 266 KPTPTPYTP-PTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTPYKPQ 318
Score = 43.2 bits (97), Expect = 2e-04
Identities = 52/195 (26%), Positives = 71/195 (36%), Gaps = 6/195 (3%)
Frame = +2
Query: 116 TPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSP 295
TP PAP P K E P + PK + + P P Y P+ + P
Sbjct: 36 TPVKPAPKPEKPPK------EHKPPHHHEPKPEKPPKEHKP-PAYTPPKPTPT-----PP 83
Query: 296 SYSFRPKFTDEKVFETPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHKPDDVPAPNTYSP 475
+Y+ PK T P+P A+ P + P+ + T+KP P P Y+P
Sbjct: 84 TYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPT----PPTYKPQPKPTPAPYTP 139
Query: 476 DKAD---KVLLNSAPQYTFRIKTDTLKT--INTPAPNAYN-LPNPVETPLYTITGRHKDP 637
K P T++ + T TP P +Y P P TP YT T P
Sbjct: 140 TPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTP-YTPT--PTPP 196
Query: 638 IDERLKVPAPGTYNP 682
+ P P Y P
Sbjct: 197 SYKPQPKPTPTPYTP 211
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/150 (25%), Positives = 47/150 (31%)
Frame = +2
Query: 236 PAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKADKVLLDSAPRYSF 415
PAP P K H H P PK + P P P + P Y+
Sbjct: 40 PAPKPEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTP-TPPTYTPTPKPTPPPYT- 97
Query: 416 RIKTNTHKPDDVPAPNTYSPDKADKVLLNSAPQYTFRIKTDTLKTINTPAPNAYNLPNPV 595
P P P TY+P + P Y + K TP P Y P P
Sbjct: 98 ---PKPTPPAHTPTPPTYTPTPTPP--KPTPPTYKPQPKPTPAPYTPTPTPPTYK-PQPK 151
Query: 596 ETPLYTITGRHKDPIDERLKVPAPGTYNPE 685
TP T + K P P +Y P+
Sbjct: 152 PTPPPTYKPQPKPTPTPYTPTPTPPSYKPQ 181
Score = 33.5 bits (73), Expect = 0.17
Identities = 37/152 (24%), Positives = 49/152 (32%), Gaps = 1/152 (0%)
Frame = +2
Query: 23 PAPNAYDPSKYDYMLDGAPKYSFGIKRPADKTPNNP-APNAYSPEKADDTLHERSPAYTF 199
P P P Y P ++ P K P P Y P+ P Y
Sbjct: 220 PQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKP 279
Query: 200 RPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKAD 379
+PK TP P Y P N + P P T K P+P+ Y P+
Sbjct: 280 QPK-------PTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTPYKPQPKPTPSPYTPKPT- 331
Query: 380 KVLLDSAPRYSFRIKTNTHKPDDVPAPNTYSP 475
+ P Y+ HKP P +Y+P
Sbjct: 332 ----PTPPTYTPTPTPPYHKP-----PPSYTP 354
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 37.9 bits (84), Expect = 0.008
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 4/216 (1%)
Frame = +2
Query: 20 NPAPNAYDPSKYDYMLDGAPKYSFGIKRPADKTPN-NPAPNAYSPEKADDTLHERSPAYT 196
+P +Y P+ Y +P Y+ + +P+ NP +YS + SP+Y+
Sbjct: 1663 SPTSLSYSPTSPVYS-PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYS 1721
Query: 197 FRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYS-FRPKFTDEKVFETPSPNAYNPEK 373
+ P S +P YN + SPSYS P ++ +P+ +Y+P
Sbjct: 1722 YSP----TSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-- 1775
Query: 374 ADKVLLDSAPRYS-FRIKTNTHKPDDVPAPNTYSPDKADKVLLNSAPQYTFRIKTDTLKT 550
++P YS + P P+ +Y+P ++ + + T T
Sbjct: 1776 TSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPT 1835
Query: 551 INTPAPNAYNLPNPVETPLYTITGR-HKDPIDERLK 655
+ +P +Y+ P+P +P + H++ +E K
Sbjct: 1836 YSPTSP-SYSQPSPSYSPTSRVEEEAHEEAEEEEPK 1870
>01_01_0050 -
382451-382864,382950-383020,383131-383176,383302-383333,
383409-383558,383666-383849,383934-384109,384580-384628,
384724-384923,385515-385548
Length = 451
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 17 DNPAPNAYDPSKYDYMLDGAPKYSFGIKR-PADKTPNNPAPNAYSPEKADDTLHERSPAY 193
+ P N++ S+ + +P+ F R P P P+P A+ + + P Y
Sbjct: 264 NGPTTNSWRASQQTNAYNTSPRSDFDSGRHPFMPVPGEPSPGAFPARSYVEQQRMQRPGY 323
Query: 194 TFRPKIDDNKFS-NTPAPNYYNPEKSENLVH 283
F+P++ +++++ +P NY+ + H
Sbjct: 324 GFQPQMSNDRWNPGSPLTNYHGAPPYQQYHH 354
>07_03_1160 - 24430240-24431268
Length = 342
Score = 35.5 bits (78), Expect = 0.042
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 11/165 (6%)
Frame = +2
Query: 29 PNAYDPSKYDY----MLDGAPKYSFGIKRPADKTPNNPAPNAY-SPEKADDTLHERSPAY 193
PN Y+PS+ D + DG P + + D+ P P PN P+ + SP
Sbjct: 148 PNTYEPSRPDQPPQPISDGPPLPNPNVPPKPDQPPQ-PIPNGPPKPDMLPMPKPDGSPN- 205
Query: 194 TFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEK 373
++ P + D S P PN P N + P+ +P + P PN P K
Sbjct: 206 SYAPSVPDQ--STQPNPN--GPS-IPNQPPQPIPNGPIKPD-------QPPQPNPDMPPK 253
Query: 374 ADKV---LLDSAPRYSFRIKTNTH---KPDDVPAPNTYSPDKADK 490
D+ D P+ + N + KPD P PN P K D+
Sbjct: 254 PDQPPQPCPDGPPKPDQPPQPNPNGPPKPDQPPQPNPNGPSKPDQ 298
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.3 bits (70), Expect = 0.39
Identities = 40/169 (23%), Positives = 61/169 (36%), Gaps = 2/169 (1%)
Frame = +2
Query: 104 PADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVH 283
PA+K+P P A SP H SP + P K TP +P H
Sbjct: 613 PAEKSPPTPESKASSPPPPAPEGHTPSPPESTPP---SEKSPPTPESKASSPPPPTPEGH 669
Query: 284 EHSPSYSFRPKFTDEKVFETP-SPNAYNPEKADKVLLDSAPRYSFRIKTNTHKPD-DVPA 457
SP S P EK TP S ++ P A + + S P+ + ++ + P+ + +
Sbjct: 670 TPSPPKSTPP---TEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASS 726
Query: 458 PNTYSPDKADKVLLNSAPQYTFRIKTDTLKTINTPAPNAYNLPNPVETP 604
P +P+ S+P + P P Y P +P
Sbjct: 727 PPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSP 775
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Frame = +2
Query: 104 PADKTPNNPAPNAYSPEKADDTLHERSPAYTFRPK-----IDDNKFSNTPAPNYY--NPE 262
P +K+P P A SP H SP + P+ I ++ P P Y +P
Sbjct: 712 PVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPP 771
Query: 263 KSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNP 367
KS + P +S E +P P+ +P
Sbjct: 772 KSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSP 806
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 341 TPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHKPDDVPAPNTYSPDKADKVLLN--SAPQ 514
+PSP + + + S+P ++ + T + +P P+ T +P + + + P+
Sbjct: 157 SPSPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPR 216
Query: 515 YTFRIKTDTLKTINTPAPNAYNLPNPVET 601
+ + + T +TPA N P+PV+T
Sbjct: 217 RSPSPASRRMSTGSTPALNRTRGPSPVKT 245
>05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-225084,
225296-225356,225666-226918
Length = 1891
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 KSENLVHEHSPSYS--FRPKFTDEKVFETPS 349
+ E L H SPS+S F PKFTDEK+ S
Sbjct: 1114 EKEGLKHRTSPSWSLSFTPKFTDEKLLTASS 1144
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 263 KSENLVHEHSPSYS--FRPKFTDEKVFETPS 349
+ E L H SPS+S F PKFTDEK+ S
Sbjct: 1118 EKEGLKHRTSPSWSLSFTPKFTDEKLLTASS 1148
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +2
Query: 131 APNAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFR 310
APNA D ERSP RP D K P+P + + E+L + SP+ +
Sbjct: 320 APNATGVLTVDSYEPERSP----RPAEDTQKEHPVPSPRRFCQDPRESLPKDESPAMKTK 375
Query: 311 P 313
P
Sbjct: 376 P 376
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 179 RSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYS 304
R A +R + ++ K + P P Y+ E++ N VH +PS++
Sbjct: 106 RPKAKKWRKEEEELKKAGKPIPMEYHNERARNWVHARTPSFN 147
>08_01_0304 -
2502760-2502774,2502844-2502921,2503035-2503103,
2503200-2503289,2503400-2503517,2505548-2505678,
2505756-2506025,2507175-2507308,2507635-2508088
Length = 452
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 257 DCSNL--VREYLKTCYHRFLDGMYMQETFREECHQLFQDYMHSV 132
DCS L + ++L + +L GM++ + E H LF Y S+
Sbjct: 393 DCSTLSQLEDHLLSLGWGYLKGMHLTVDLKVEVHNLFDSYRESI 436
>04_03_0772 -
19438910-19439209,19439692-19439828,19441334-19441570,
19441948-19442149,19442761-19442858,19443082-19443665,
19443725-19443882
Length = 571
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 541 SVRFDSKCILRCAI*EDFVGF 479
+VR+D +C+LR A +DF GF
Sbjct: 101 AVRYDDRCLLRFAKGDDFTGF 121
>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
Length = 330
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 281 HEHSPSYSFRPKFTDEKVFETPSPNAYNPEKAD 379
H H S+ P ++ T SPN YNP ++
Sbjct: 130 HHHHHSFQTTPSSSNAAAVATTSPNYYNPNNSN 162
>06_01_0892 - 6827510-6827590,6829348-6830412
Length = 381
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +2
Query: 131 APNAYSPEKADDTLHER-SPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHS----- 292
AP+ + E + H + PAY FRP+ + + + A + Y P+ + + S
Sbjct: 63 APHYSADEPSPYAHHSKPQPAYGFRPQHEQQQ-QPSYASSGYRPQHEQQQSYGSSGYGSK 121
Query: 293 --PSYSFRPKFTDEKVFETPSPNAY 361
P+Y FRP+ +E + + + Y
Sbjct: 122 PQPAYGFRPQAEEENTYGSGYGSGY 146
>04_04_0674 +
27173948-27174188,27174704-27175260,27175310-27175399,
27175475-27175714,27175801-27176022,27176124-27176433,
27176528-27176847,27176906-27177021,27177133-27177227,
27177331-27177407,27177520-27177615
Length = 787
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +2
Query: 311 PKFTDEKVFETPSPNAYNPEKADKVLLDSAPRYSFRIKTNTHKPDDVPAPNTYSPDKADK 490
PK ++K PSP P +K D+A + +H D+ TY DK ++
Sbjct: 45 PKVEEQK--RQPSPPLQQPAAEEKASSDAAANGA------SHGEDEGTTKETYEEDKGER 96
Query: 491 VLLNSAPQY 517
+ P+Y
Sbjct: 97 LEFEDEPEY 105
>02_05_0971 -
33188816-33188965,33190406-33190705,33191500-33191562,
33191637-33191710,33191880-33191973,33193396-33193482,
33193753-33193887
Length = 300
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +2
Query: 215 DNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYNPEKADKVLLD 394
D+ F N P+ Y+ +S+ SPS S P E+PS N N + +
Sbjct: 172 DSGFCNGPSKCYHTQAQSQTRTSSTSPSMSPSPPPPVATEAESPSCNGINKRGSSAMDSG 231
Query: 395 SAPRYS 412
PR S
Sbjct: 232 KPPRAS 237
>08_02_0172 -
13733527-13733614,13733700-13733749,13733823-13733918,
13734082-13734156,13735026-13735127,13735542-13735619,
13735704-13735899,13736445-13736530,13737803-13737994,
13740068-13740175,13740256-13740368,13740655-13740721
Length = 416
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 177 KGLLHIHSVQKSMITSFQILPHQITTILKKART*YTNTHRR 299
+GLL + + K ++ Q++P+ T +++ RT TH R
Sbjct: 49 QGLLAVDIIAKEVLGWVQLMPNYATELVEYVRTFLERTHER 89
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 179 RSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYS 304
R A +R + ++ K + P P ++ E++ N VH +PS++
Sbjct: 278 RPKAKKWRKEEEELKKAGKPIPMEHHNERARNWVHARTPSFN 319
>01_07_0334 -
42818738-42818879,42818987-42819120,42819220-42819326,
42819413-42819509,42819661-42819840,42820278-42820345,
42820576-42820633,42820794-42820991
Length = 327
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 524 RIKTDTLKTINTPAPNAYNLPNPVETPLYTITGRHKDP 637
+I T+ K +NT AP+ Y NPV YT+ K P
Sbjct: 114 QILTEAAKLLNTDAPDLYIRQNPVPN-AYTLAISGKKP 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,243,339
Number of Sequences: 37544
Number of extensions: 498431
Number of successful extensions: 1440
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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