Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0317
(715 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 2.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 3.8
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 3.8
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 3.8
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 5.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 8.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 8.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.8
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = +2
Query: 257 PEKSENLVHEHSPSYSFRPKFTDEKVFETPSPNAYN 364
P + + HE ++ P F E P+P ++N
Sbjct: 274 PASASSNEHEAESEHTSTPNFLSEAKIFPPTPGSFN 309
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 95 IKRPADKTPNNPAPNAYSPEKADD 166
+KRP+D + P P P ADD
Sbjct: 306 LKRPSDGATSEPFPFLMLPLGADD 329
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 3.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 173 EECHQLFQDYMHSVLD 126
+EC +F+ + H+VLD
Sbjct: 154 QECPLIFESWTHNVLD 169
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 3 TRS*KITQRRTLTILANMIICWT 71
TR+ T + T+ I+A ICWT
Sbjct: 252 TRAKIRTLKMTVIIIAVFFICWT 274
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 490 FVGFVGAVSVGCGN 449
FVG VG +VGC N
Sbjct: 316 FVGLVGNSAVGCWN 329
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = -1
Query: 178 FVKSVISFFRTICIRCWI-----VGGF--ICRSFYTKTVFRSPVQHIIIFARIVSV 32
FV +SF T+ R W+ +G + Y +++F + + II+++ + V
Sbjct: 103 FVNDTVSFTTTVSARFWLMDCRNIGAVPKMATELYEESLFVPYITNFIIYSKRMDV 158
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 227 SNTPAPNYYNPEKSENLVHEHSPSYS 304
++ P P NPE + NLV+ ++ +S
Sbjct: 305 TSKPLPMVDNPESTGNLVYIYNNPFS 330
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 569 NAYNLPNPVETPLYTITGRHKDPIDERLKVPAPGTYNPEKGYKLILT 709
N YN + +E L T + +++R VPA EK I+T
Sbjct: 376 NIYNASSRMENNLRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVT 422
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 254 CSNLVREYLKTC 219
C N+V Y KTC
Sbjct: 290 CVNIVTSYCKTC 301
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 8.8
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +2
Query: 2 HEELEDNPAPNAYDPSKYD 58
H + P P+++DP ++D
Sbjct: 404 HRDSAIYPNPDSFDPERFD 422
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.8
Identities = 15/72 (20%), Positives = 30/72 (41%)
Frame = +2
Query: 137 NAYSPEKADDTLHERSPAYTFRPKIDDNKFSNTPAPNYYNPEKSENLVHEHSPSYSFRPK 316
N S K +T ERS T R + + K ++ + NY + + N + ++ +
Sbjct: 290 NENSYRKYRETSKERSRDKTERERSKERKIISSLSNNYISNISNYNNNNNYNKKLYYNIN 349
Query: 317 FTDEKVFETPSP 352
+ ++ P P
Sbjct: 350 YIEQIPVPVPVP 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,210
Number of Sequences: 438
Number of extensions: 6464
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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