Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0315
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021371-1|AAX33519.1|  409|Drosophila melanogaster LP03784p pro...    50   4e-06
BT001838-1|AAN71595.1|  409|Drosophila melanogaster RH51659p pro...    50   4e-06
AY119233-1|AAM51093.1|  261|Drosophila melanogaster SD18286p pro...    50   4e-06
AY115551-1|AAM66763.1|  415|Drosophila melanogaster DARTH protein.     50   4e-06
AF521176-1|AAM76710.1|  415|Drosophila melanogaster eiger protein.     50   4e-06
AF149799-1|AAO15310.1|  409|Drosophila melanogaster tumor necros...    50   4e-06
AE013599-1011|AAS64883.1|  409|Drosophila melanogaster CG12919-P...    50   4e-06
AE013599-1010|AAF58848.2|  415|Drosophila melanogaster CG12919-P...    50   4e-06
AB073865-1|BAC00950.1|  409|Drosophila melanogaster TNF superfam...    50   4e-06
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro...    29   7.3  
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P...    29   7.3  
AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p pro...    28   9.7  
AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA...    28   9.7  

>BT021371-1|AAX33519.1|  409|Drosophila melanogaster LP03784p
           protein.
          Length = 409

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 311 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 363

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 364 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 409


>BT001838-1|AAN71595.1|  409|Drosophila melanogaster RH51659p
           protein.
          Length = 409

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 311 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 363

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 364 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 409


>AY119233-1|AAM51093.1|  261|Drosophila melanogaster SD18286p
           protein.
          Length = 261

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 163 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 215

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 216 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 261


>AY115551-1|AAM66763.1|  415|Drosophila melanogaster DARTH protein.
          Length = 415

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 317 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 369

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 370 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415


>AF521176-1|AAM76710.1|  415|Drosophila melanogaster eiger protein.
          Length = 415

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 317 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 369

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 370 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415


>AF149799-1|AAO15310.1|  409|Drosophila melanogaster tumor necrosis
           factor family memberDT1 protein.
          Length = 409

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 311 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 363

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 364 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 409


>AE013599-1011|AAS64883.1|  409|Drosophila melanogaster CG12919-PB,
           isoform B protein.
          Length = 409

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 311 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 363

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 364 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 409


>AE013599-1010|AAF58848.2|  415|Drosophila melanogaster CG12919-PA,
           isoform A protein.
          Length = 415

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 317 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 369

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 370 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415


>AB073865-1|BAC00950.1|  409|Drosophila melanogaster TNF superfamily
           ligand, Eiger protein.
          Length = 409

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 71  THSGHVRVHHTGVYLVYAQIYYLDSHDVISWVLHRTNPESDGRDTLLQCAQSSHSTEVLD 250
           T  G + V +TG+Y VYAQI Y +SHD   +++ +      G    LQC  ++  T +  
Sbjct: 311 TRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ------GDTPFLQCL-NTVPTNMPH 363

Query: 251 KPNSCFSASALFLRAGDRLAVRNTGGDRHSLMQP--EKSFIGLIKL 382
           K ++C ++  + L   +R+ +++   DR+++++    +S+ G+ K+
Sbjct: 364 KVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 409


>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p
           protein.
          Length = 1082

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 29  SQWTISSPPPRPTLTHSGHVRVHHTGVYL 115
           S + ++S PP+P     G +R HH G+++
Sbjct: 75  SNFNMNSQPPQPMRQSCGELRNHHCGLFV 103


>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
           protein.
          Length = 1082

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 29  SQWTISSPPPRPTLTHSGHVRVHHTGVYL 115
           S + ++S PP+P     G +R HH G+++
Sbjct: 75  SNFNMNSQPPQPMRQSCGELRNHHCGLFV 103


>AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p
           protein.
          Length = 1517

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 426 NGYYYRSCAGSSASANLMRPMKLFSGCMRECLSPPVFLTA 307
           N ++  +    S + NLM P++ F+   +   +PPV+++A
Sbjct: 49  NNHHNNTLVSPSGNNNLMTPVQAFTPTGQPVYNPPVYMSA 88


>AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA
           protein.
          Length = 1517

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 426 NGYYYRSCAGSSASANLMRPMKLFSGCMRECLSPPVFLTA 307
           N ++  +    S + NLM P++ F+   +   +PPV+++A
Sbjct: 49  NNHHNNTLVSPSGNNNLMTPVQAFTPTGQPVYNPPVYMSA 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,360,760
Number of Sequences: 53049
Number of extensions: 548418
Number of successful extensions: 1583
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)