Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0311
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 338 TWCNLINKCLYAM 376
           TW   + KCLY +
Sbjct: 136 TWIRAVRKCLYKL 148


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 338 TWCNLINKCLYAM 376
           TW   + KCLY +
Sbjct: 136 TWIRAVRKCLYKL 148


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 1   FTLNNQFIFFFCSYYS 48
           FT++N+ +F   +YYS
Sbjct: 299 FTIDNKLLFGVLAYYS 314


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -3

Query: 566 YLPI*YTHMLTSSINEKYKRWDKRVSKKDSYNWNDCT 456
           Y PI +       + +K++RW   +S+     +N  T
Sbjct: 457 YQPIYFVAESFDDMKDKFRRWVSAMSRPFEVRFNPHT 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,093
Number of Sequences: 336
Number of extensions: 2784
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)