Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0311
         (676 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote...    30   1.6  
At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family...    30   1.6  

>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 785

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 323 GHQYKTLTKVHDKGHLNYKCNR 258
           GH +  L+  H  GHLN  CNR
Sbjct: 274 GHIFNGLSSAHKLGHLNLACNR 295


>At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 1338

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = -3

Query: 404 YLLLFTYKISLHKGIYLL-------SCTKLHQQSGHQYKTLTKVHDKGHLNYK 267
           +LLL ++K+ L   +YLL       SCT ++   G + + LTK  DKG   YK
Sbjct: 699 FLLLLSWKVLLPARVYLLRGSHESESCTSMY---GFKNEVLTKYGDKGAAVYK 748


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,513,927
Number of Sequences: 28952
Number of extensions: 197199
Number of successful extensions: 427
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)