Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0310
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 153 5e-36
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 141 2e-32
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 140 3e-32
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 138 9e-32
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 135 8e-31
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 135 1e-30
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 135 1e-30
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 124 2e-27
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 120 4e-26
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 118 1e-25
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 118 2e-25
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 117 2e-25
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 117 3e-25
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 116 7e-25
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 108 1e-22
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 107 3e-22
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 105 8e-22
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 102 9e-21
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 99 5e-20
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 100 7e-20
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 98 2e-19
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 98 2e-19
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 98 2e-19
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 98 2e-19
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 94 3e-18
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 93 6e-18
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 93 8e-18
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 91 2e-17
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 90 5e-17
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 89 7e-17
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 89 9e-17
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 88 2e-16
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 85 2e-15
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 82 1e-14
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 82 1e-14
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 81 2e-14
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 81 3e-14
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 79 7e-14
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 79 1e-13
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 78 2e-13
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 77 5e-13
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 77 5e-13
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 77 5e-13
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 76 7e-13
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 75 2e-12
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 73 6e-12
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 73 9e-12
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 73 9e-12
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 71 2e-11
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 70 6e-11
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 70 6e-11
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 69 1e-10
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 69 1e-10
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 68 2e-10
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 68 2e-10
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 66 7e-10
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 64 3e-09
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 64 4e-09
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 63 5e-09
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 62 9e-09
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 61 2e-08
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 60 4e-08
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 60 6e-08
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 56 8e-07
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 56 8e-07
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 3e-06
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 53 6e-06
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 50 4e-05
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 50 5e-05
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 49 1e-04
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 48 2e-04
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 48 2e-04
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 48 2e-04
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 47 4e-04
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 47 4e-04
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 46 9e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 46 0.001
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 46 0.001
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 46 0.001
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 45 0.001
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.002
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 44 0.003
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 42 0.011
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 42 0.011
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.032
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 40 0.042
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 40 0.056
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 40 0.056
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 40 0.056
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 40 0.074
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 39 0.098
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.13
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 38 0.17
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 38 0.23
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 38 0.30
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 37 0.40
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 37 0.52
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 37 0.52
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 36 0.69
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 36 0.69
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 36 0.69
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 36 0.69
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 36 1.2
UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 2.8
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 34 2.8
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.7
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 33 4.9
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 33 4.9
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 33 4.9
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 33 6.4
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 8.5
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 33 8.5
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 153 bits (370), Expect = 5e-36
Identities = 77/140 (55%), Positives = 86/140 (61%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFICIYLH+G GIYY S+ L YVLP GQ+SFW ATVITNL
Sbjct: 91 FFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITNL 150
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
L AIPYLG LV + GGFAVDNATLTRF+T QTGSNNP+
Sbjct: 151 LYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNPI 210
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
GLN N+DKIPFHP+FTFKD+
Sbjct: 211 GLNSNIDKIPFHPYFTFKDI 230
Score = 98.3 bits (234), Expect = 2e-19
Identities = 48/89 (53%), Positives = 59/89 (66%)
Frame = +1
Query: 19 PIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRVNY 198
P+FKI NN LCLIIQI+TGLFL ++YTA+I +AFY VN+
Sbjct: 10 PLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNH 69
Query: 199 ICRNVNYG*IIRTLHANGASFFLFAFIYI 285
ICR+VNYG ++RTLHANGASFF F IY+
Sbjct: 70 ICRDVNYGWLLRTLHANGASFF-FICIYL 97
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 141 bits (341), Expect = 2e-32
Identities = 69/140 (49%), Positives = 85/140 (60%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFIC+Y+HIG GI+Y S+ + + YVLP GQ+SFWGATVITNL
Sbjct: 7 FFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGATVITNL 66
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
SAIP++GT LV I GGF+V NATLTRF+T Q G+NNPL
Sbjct: 67 FSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQAGANNPL 126
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G++ DKIPFHP+FTFKD+
Sbjct: 127 GISSQSDKIPFHPYFTFKDI 146
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 140 bits (339), Expect = 3e-32
Identities = 68/140 (48%), Positives = 86/140 (61%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFI +Y+HI G+Y+ SF LK + YVLP GQ+SFWGATVITNL
Sbjct: 87 FFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNL 146
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
LSAIPY+GT + I GGF+VDN TLTRF+T +TGS+NPL
Sbjct: 147 LSAIPYIGTSITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNPL 206
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G++ N+DKIPFHP++T KD+
Sbjct: 207 GISNNIDKIPFHPYYTLKDI 226
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFF F F+YI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFF-FIFLYI 93
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 138 bits (335), Expect = 9e-32
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFIC+++HIG G+YY S+ YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITN 148
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLSAIPY+GT LV I GGF+VD ATLTRF+ +TGSNNP
Sbjct: 149 LLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNP 208
Query: 618 LGLNRNLDKIPFHPFFTFKDL 680
G+ N DKIPFHP++T KD+
Sbjct: 209 TGIPSNTDKIPFHPYYTIKDI 229
Score = 82.6 bits (195), Expect = 8e-15
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+ KI+NN +CLI+QI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
V +ICR+VNYG IIR +HANGAS FF+ F++I
Sbjct: 66 VTHICRDVNYGWIIRYMHANGASMFFICLFMHI 98
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 135 bits (327), Expect = 8e-31
Identities = 78/208 (37%), Positives = 113/208 (54%), Gaps = 1/208 (0%)
Frame = +3
Query: 57 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 236
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 237 ITC*WSF-IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 413
ITC + ++ + +++ ++ + YVLP GQ+SF
Sbjct: 84 ITCKRGINLLYLFMSSRWSSNMFW-ILHILFTWTTGVVLLLLVMMTAFVGYVLPWGQMSF 142
Query: 414 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXX 593
WGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 143 WGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIAAMVILHLLFL 202
Query: 594 XQTGSNNPLGLNRNLDKIPFHPFFTFKD 677
QTGSNNP G+++NLDK+ FHPFF+ KD
Sbjct: 203 HQTGSNNPAGMSKNLDKVSFHPFFSVKD 230
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 135 bits (326), Expect = 1e-30
Identities = 68/140 (48%), Positives = 83/140 (59%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFIC++LHIG G+YY SF YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITN 148
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLSAIPY+GT LV I GG++VD+ TLTRF+T +TGSNNP
Sbjct: 149 LLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNP 208
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
LG+ + DKI FHP++T KD
Sbjct: 209 LGITSHSDKITFHPYYTIKD 228
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+ K+IN+ CLI+QI TGLFL ++Y+ + AF
Sbjct: 6 KINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ +I R+VNYG IIR LHANGAS FF+ F++I
Sbjct: 66 IAHITRDVNYGWIIRYLHANGASMFFICLFLHI 98
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 135 bits (326), Expect = 1e-30
Identities = 67/141 (47%), Positives = 83/141 (58%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFIC++LH+G G+YY S+ YVLP GQ+SFWGATVITN
Sbjct: 89 MFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITN 148
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLSAIPY+G+ LV I GGF+VD ATLTRF+ +TGSNNP
Sbjct: 149 LLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNP 208
Query: 618 LGLNRNLDKIPFHPFFTFKDL 680
GL + DKIPFHP++T KD+
Sbjct: 209 SGLPSDADKIPFHPYYTIKDI 229
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+ KIIN+ +CLIIQI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
V +ICR+VNYG +IR LHANGAS FF+ F+++
Sbjct: 66 VTHICRDVNYGWLIRYLHANGASMFFICLFLHV 98
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 124 bits (300), Expect = 2e-27
Identities = 62/140 (44%), Positives = 79/140 (56%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFICIY+HI G+YY + K V L YVLP GQ+SFW ATVITN
Sbjct: 81 LFFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITN 140
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LL+AIPYLG + + GGF++++ TLTRF GSNNP
Sbjct: 141 LLTAIPYLGVAVTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNP 200
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
LG N ++DKIPFHP+ ++KD
Sbjct: 201 LGTNSDIDKIPFHPYHSYKD 220
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 288
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FF+ +I+I+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 120 bits (288), Expect = 4e-26
Identities = 59/140 (42%), Positives = 79/140 (56%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FF+ IYLHIG G+YY SF++K L YVLP GQ+SFWGATVITNL
Sbjct: 101 FFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNL 160
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
A+PY+G+ L+ + GG V +ATL RF+ +TGS+NPL
Sbjct: 161 FGAVPYVGSTLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNPL 220
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G++ + D +PFH ++ KDL
Sbjct: 221 GVDSSGDLVPFHNYYLLKDL 240
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF+ +++I
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 118 bits (285), Expect = 1e-25
Identities = 57/99 (57%), Positives = 67/99 (67%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 563
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 564 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
+TGSNNP GLN + DKI FHP+F++KDL
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDL 230
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 118 bits (283), Expect = 2e-25
Identities = 64/142 (45%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 434
FFI +YLHIG +YY S+ L YVLP GQ+SFWGATVIT
Sbjct: 89 FFIWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVIT 148
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNN 614
NLLSAIP++GT V + GGF+VDNATL RF++ Q GSNN
Sbjct: 149 NLLSAIPWIGTDFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSNN 208
Query: 615 PLGLNRNLDKIPFHPFFTFKDL 680
P G++ + D++ FHP+FT KDL
Sbjct: 209 PEGISSSSDRLRFHPYFTSKDL 230
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K PI ++N+ + L+I II+GL L ++YT N +AF
Sbjct: 5 KRNPILVLVNDFVIDSPLPTNLTYFWNFGSLLGVNLVILIISGLTLAMHYTPNTLLAFSS 64
Query: 190 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
V +I R+VN G ++R +HANGASFF F ++Y+
Sbjct: 65 VEHIMRDVNNGWLLRYIHANGASFF-FIWVYL 95
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 117 bits (282), Expect = 2e-25
Identities = 60/140 (42%), Positives = 78/140 (55%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FF C+Y HIG G+YY + + V L YVLP GQ+SFWGATVITNL
Sbjct: 94 FFFCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNL 153
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
L+AIP +G+ LV + GGF+V TLTRFY+ GS+NPL
Sbjct: 154 LTAIPMVGSPLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNPL 213
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G++ + KI FHP+++ KDL
Sbjct: 214 GISSDTGKIRFHPYYSTKDL 233
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 270
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS F F
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFF 96
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 117 bits (281), Expect = 3e-25
Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FFI +YLHI G+YY S++ ++V YVLP GQ+SFWGATVI
Sbjct: 94 MFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVI 153
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T+L SAIP +G +V + GGF+VDNATL RF++ Q GSN
Sbjct: 154 TSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSN 213
Query: 612 NPLGLNRNLDKIPFHPFFTFKDL 680
NPLG++ +DKI F+P+F KDL
Sbjct: 214 NPLGVHSEMDKIAFYPYFYVKDL 236
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FF+ +++I
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 116 bits (278), Expect = 7e-25
Identities = 62/149 (41%), Positives = 77/149 (51%)
Frame = +3
Query: 234 NITC*WSFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISF 413
NI S +FFICIY HI G+YY S+ K V Y LP GQ+S+
Sbjct: 96 NIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSY 155
Query: 414 WGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXX 593
WGATVITN+LS P +G ++ + GG+ V NATL RFYT
Sbjct: 156 WGATVITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLHLFFL 215
Query: 594 XQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
+ GSNNPLG+ +PFHPF+T KDL
Sbjct: 216 HEKGSNNPLGIESGTMCVPFHPFYTIKDL 244
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
LCL+IQ+++GL L+ +YTA+ ++AF V +I RNV G ++R +HANG+S F F IY
Sbjct: 54 LCLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHANGSSMF-FICIY 110
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 108 bits (259), Expect = 1e-22
Identities = 54/140 (38%), Positives = 71/140 (50%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
IFF+C+YLHI IY+ ++ K YVLP GQ+SFW ATVITN
Sbjct: 96 IFFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITN 155
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
L SAIPY+G +V I G F++ NATL RFY+ + +NP
Sbjct: 156 LFSAIPYIGNTIVLWIWGSFSISNATLNRFYSLHYLLPFILTTLIGMHILALQEENHSNP 215
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
G +D +PFH ++T KD
Sbjct: 216 TGTQSEVDSLPFHQYYTTKD 235
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FFL +++I
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 286 S 288
S
Sbjct: 106 S 106
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 107 bits (256), Expect = 3e-22
Identities = 53/90 (58%), Positives = 60/90 (66%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFICIYLHIG G+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 86 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL 145
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
LSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 146 LSAVPYMGNALVQWIWGGFSVDNATLTRFF 175
Score = 107 bits (256), Expect = 3e-22
Identities = 53/90 (58%), Positives = 60/90 (66%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFICIYLHIG G+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 273 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNL 332
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
LSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 333 LSAVPYMGNALVQWIWGGFSVDNATLTRFF 362
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/92 (47%), Positives = 56/92 (60%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 2 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 61
Query: 190 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
V +ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 62 VVHICRDVNYGWIIRNLHANGASFF-FICIYL 92
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/92 (47%), Positives = 56/92 (60%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+FKI+N+ LCL +QI+TGLFL ++YT++I AF
Sbjct: 189 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 248
Query: 190 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
V +ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 249 VVHICRDVNYGWIIRNLHANGASFF-FICIYL 279
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 105 bits (253), Expect = 8e-22
Identities = 52/92 (56%), Positives = 60/92 (65%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FF CIYLHIG G+YY S LK YVLP GQ+SFWGATVITN
Sbjct: 46 MFFFCIYLHIGRGLYYGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITN 105
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
L SA+PY+G LV+ GGFA+DNATLTRF+T
Sbjct: 106 LSSALPYIGPTLVHWTWGGFAIDNATLTRFFT 137
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 124 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS F F IY+
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFC-IYL 53
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 102 bits (244), Expect = 9e-21
Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FFI +Y+H+ G+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 100 MFFIVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVI 159
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
TNL SAIP +G +V + GGF+VDN TL RF++ SN
Sbjct: 160 TNLFSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYLFPMLLFAVVFLHMWALHVKKSN 219
Query: 612 NPLGLNRN--LDKIPFHPFFTFKD 677
NPLG++ D IPFHP++T KD
Sbjct: 220 NPLGIDAKGPFDTIPFHPYYTVKD 243
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS F F +Y+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMF-FIVVYV 107
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 99 bits (238), Expect = 5e-20
Identities = 48/96 (50%), Positives = 63/96 (65%)
Frame = +3
Query: 393 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 572
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 573 XXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
QTGS NP+GLN N++KIPF+P+++ +DL
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQDL 97
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 99.5 bits (237), Expect = 7e-20
Identities = 49/90 (54%), Positives = 58/90 (64%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FFIC+Y+HI G+YY S+ K YVLP GQ+SFWGATVITNL
Sbjct: 90 FFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNL 149
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
LSA+PY+G LV I GGF+VD ATLTRF+
Sbjct: 150 LSAVPYMGDTLVQWIWGGFSVDXATLTRFF 179
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/92 (45%), Positives = 54/92 (58%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K P+ KI N LCLI QI+TGLFL ++YT++I AF
Sbjct: 6 KTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
V +ICR+VNYG +IR+LHANGASFF F +Y+
Sbjct: 66 VTHICRDVNYGWLIRSLHANGASFF-FICLYM 96
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 428
S IFF+ IYLH+ G+ + SF++ K + YVLP GQ+S WGATV
Sbjct: 82 SIIFFL-IYLHMTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATV 140
Query: 429 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 608
ITNLLSAIP +G ++V I GG+ V N T+ F++ GS
Sbjct: 141 ITNLLSAIPVIGKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYGS 200
Query: 609 NNPLGLNRNLDKIPFHPFFTFKDL 680
NNP+G N +L KI F+P ++FKDL
Sbjct: 201 NNPIG-NFSLMKIEFNPIYSFKDL 223
Score = 41.5 bits (93), Expect = 0.018
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 106 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+L + IQIITGLFLT YY N E F + I YG ++ +H N S +F IY+
Sbjct: 33 SLIMSIQIITGLFLTFYY-ENSENCFDSIYIIHIETFYGVLVHFIHLN-VSSIIFFLIYL 90
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/85 (56%), Positives = 55/85 (64%)
Frame = +3
Query: 426 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 605
VITNLLSAIPYLG L + GGFAVDNATLTRF+ QTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 606 SNNPLGLNRNLDKIPFHPFFTFKDL 680
S NPLG+N N+DKIPFHP+FT+KD+
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYKDI 85
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 97.9 bits (233), Expect = 2e-19
Identities = 56/143 (39%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FF +Y+HIG GIYY + V YVLP GQ+S+W + VIT+
Sbjct: 87 MFFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITS 146
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLS IPY+G LV I GGF+V ATLTRFY+ +TGS+NP
Sbjct: 147 LLSTIPYIGPSLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGSSNP 206
Query: 618 LGL--NRNLDKIPFHPFFTFKDL 680
LGL + FHP ++ DL
Sbjct: 207 LGLYDPSGVCMRSFHPLYSCNDL 229
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS F F F+YI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFF-FMYI 94
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 97.9 bits (233), Expect = 2e-19
Identities = 53/142 (37%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 434
FF+ +++H+ G+YY S+ V L Y GQ+S WGATVIT
Sbjct: 89 FFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVIT 148
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNN 614
NL SAIP++G +V+ + GGF+V N T+ RF+ GS+N
Sbjct: 149 NLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSN 208
Query: 615 PLGLNRNLDKIPFHPFFTFKDL 680
PLG+ NLD+IP H +F FKDL
Sbjct: 209 PLGITGNLDRIPMHSYFIFKDL 230
Score = 72.5 bits (170), Expect = 9e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 264
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Frame = +3
Query: 219 WLNNSNITC*WSFIFFICIYLHIGLGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVL 392
WL + C S +FF +Y+H+ G+YY S+ + + + YVL
Sbjct: 90 WLLRNMHACGAS-MFFFAVYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVL 148
Query: 393 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 572
P GQ+SFWGATVITNL SAIPY G +V + GG++V N TL RF++
Sbjct: 149 PWGQMSFWGATVITNLFSAIPYFGESIVTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVV 208
Query: 573 XXXXXXXXQTGSNNPLGLNRNLDK--IPFHPFFTFKDL 680
G NNP G+ +K +PF P T KD+
Sbjct: 209 VLHVWALHVAGQNNPEGVEPKSEKDTVPFTPHATIKDM 246
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = +1
Query: 121 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS F FA +Y+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA-VYV 109
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 93.1 bits (221), Expect = 6e-18
Identities = 49/137 (35%), Positives = 70/137 (51%)
Frame = +3
Query: 270 CIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSA 449
CIY+HIG G+YY SF L V YVLP GQ+++W A VI+++++A
Sbjct: 94 CIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTA 153
Query: 450 IPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLN 629
IP +G + + GG+AV N TL R ++ +GS NPLGL+
Sbjct: 154 IPKVGGEVAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGSGNPLGLD 213
Query: 630 RNLDKIPFHPFFTFKDL 680
+ + FH FF+ KDL
Sbjct: 214 SDCSLVRFHSFFSVKDL 230
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F L IY+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFML-GCIYV 97
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 92.7 bits (220), Expect = 8e-18
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FF+ ++LH+ +YY S + + + + YVLP GQ+SFWGATVI
Sbjct: 88 LFFVAVFLHLFRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVI 147
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T+L+SA+P +GT LV + GGF+V N TL RF++ GS
Sbjct: 148 TSLVSAVPIVGTDLVYYLWGGFSVSNPTLNRFFSFHYLLPFVLAGLSIAHLAALHSYGST 207
Query: 612 NPLGLNRNLDKIPFHPFFTFKDL 680
NPL +N ++ K+PF ++ KDL
Sbjct: 208 NPLSIN-SVAKVPFGSYYIIKDL 229
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF+ F+++
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 91.5 bits (217), Expect = 2e-17
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FFI +YLHI G+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 103 LFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVI 162
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T L AIP +G + + GG AVDNATL RF++ TG+N
Sbjct: 163 TGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNN 222
Query: 612 NPLGL--------NRNLDKIPFHPFFTFKDL 680
NP G+ D +PF P+F KD+
Sbjct: 223 NPTGVEVRRTSKAEAQKDTVPFWPYFIIKDV 253
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 106 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 282
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FF+ +++
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 283 I 285
I
Sbjct: 112 I 112
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 89.8 bits (213), Expect = 5e-17
Identities = 50/140 (35%), Positives = 68/140 (48%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+F +YLHI G+ Y SF V YVLP G +S+WG TV+TN
Sbjct: 85 LFMFIMYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTN 144
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
+LSAIP +G LV I GG + +TL RF++ + GS+NP
Sbjct: 145 MLSAIPMVGVYLVETIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNP 204
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
LG+ + +K FHP F+ KD
Sbjct: 205 LGVYYSCEKFTFHPLFSLKD 224
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 89.4 bits (212), Expect = 7e-17
Identities = 52/143 (36%), Positives = 71/143 (49%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
SFIF + +Y H+ G+ Y SF L L YV+P G +SFW ATVI
Sbjct: 85 SFIF-MTMYAHMFKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVI 143
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T+ +SAIP LG ++ I GG+++ TL F+T GS+
Sbjct: 144 TSFMSAIPILGESILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSS 203
Query: 612 NPLGLNRNLDKIPFHPFFTFKDL 680
NPLG + ++ K FHPFFT KD+
Sbjct: 204 NPLGTHSHMLKTKFHPFFTNKDM 226
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGAS F+F +Y
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGAS-FIFMTMY 92
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 89.0 bits (211), Expect = 9e-17
Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FF+ +Y+HI G+YY S+ + + YVLP GQ+SFWGATVI
Sbjct: 103 LFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVI 162
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T L AIP +G + + GG AVDN TL RF++ TG+N
Sbjct: 163 TGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNN 222
Query: 612 NPLGL--------NRNLDKIPFHPFFTFKDL 680
NP G+ D +PF P+F KDL
Sbjct: 223 NPTGVEVRRGSKEEAKKDTLPFWPYFVIKDL 253
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/61 (50%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 106 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 282
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FFL +I+
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 283 I 285
I
Sbjct: 112 I 112
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/140 (34%), Positives = 69/140 (49%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FF +Y H+G G+YY S+ YVLP GQ+SFWGATVI+N
Sbjct: 92 FFFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNF 151
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
L+ IP+ G L+ + GG++V + TL+RF+ + G++NPL
Sbjct: 152 LTVIPFFGDTLLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNPL 211
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G++ D I P + FKDL
Sbjct: 212 GVS-TTDWITLSPGYVFKDL 230
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS F F F+Y
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFF-FMY 97
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 84.6 bits (200), Expect = 2e-15
Identities = 52/140 (37%), Positives = 64/140 (45%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FF +YLHIG G+Y + L V + YV P GQI GATVIT+L
Sbjct: 95 FFFWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSL 154
Query: 441 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 620
LSAIPY+G LV + GGF V TL RF++ NP+
Sbjct: 155 LSAIPYMGGFLVKWVWGGFFVKGPTLHRFFSLHYLLPLILSVFVFFQVFFFQSKSGVNPM 214
Query: 621 GLNRNLDKIPFHPFFTFKDL 680
G + N K F P+F F DL
Sbjct: 215 GGSLNSKKGFFVPYFFFVDL 234
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/59 (45%), Positives = 44/59 (74%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFF F ++Y+
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFF-WVYL 101
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/91 (46%), Positives = 54/91 (59%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K+ P+ KI N+ LCLI QI+TGLFL ++YT++I AF
Sbjct: 6 KSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
V +ICR+VNYG +IR +HANGASFF F IY
Sbjct: 66 VTHICRDVNYGWLIRNMHANGASFF-FICIY 95
Score = 36.3 bits (80), Expect = 0.69
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLK 323
FFICIY HIG G+YY S+ K
Sbjct: 90 FFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/94 (45%), Positives = 54/94 (57%)
Frame = +3
Query: 399 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 578
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 579 XXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
+TGS+NPL L+ + K+ F P+ KD+
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPYSGVKDM 98
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/79 (51%), Positives = 48/79 (60%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFICIY HI G+YY S+ K V L YVLP GQ+SFW ATVITN
Sbjct: 81 LFFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITN 140
Query: 438 LLSAIPYLGTILVN*I*GG 494
LL+AIPYLGT + + GG
Sbjct: 141 LLTAIPYLGTTMTXWLWGG 159
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS F F IY
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLF-FICIY 87
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FF Y H+ G++Y ++ LK +V YVLP G +S+WG TVI
Sbjct: 90 LFFALTYAHVARGVFYGAY-LKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVI 148
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
TN+++ +P G ++ GGF + + TL R + Q GS+
Sbjct: 149 TNMMTVVPG-GARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSS 207
Query: 612 NPLGLNRNLDKIPFHPFFTFKDL 680
NPLGL++ +PFHP+++ KDL
Sbjct: 208 NPLGLDQEGINVPFHPYYSIKDL 230
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 282
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS F FA Y
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLF-FALTY 96
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K+ P+ KIIN+ +CL++QIITGLFL ++YTA+ AF
Sbjct: 6 KSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFSS 65
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 288
+ +ICR+VNYG +IR HANGAS FF+ +I+I+
Sbjct: 66 IAHICRDVNYGWVIRYTHANGASMFFICLYIHIA 99
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLK 323
+FFIC+Y+HI G+YY S+ K
Sbjct: 89 MFFICLYIHIARGLYYGSYLFK 110
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 78.6 bits (185), Expect = 1e-13
Identities = 48/140 (34%), Positives = 68/140 (48%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FF+ IYLHI G+ S+ L V + YVL GQ+S+W A VIT+
Sbjct: 78 MFFLFIYLHIFKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITS 137
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
L++++PYLG +V I G F+V TL FY+ TGS++
Sbjct: 138 LMTSVPYLGKYMVWWIWGSFSVCENTLKFFYSIHFIFPWLLLVMVIFHLFFLHFTGSSSS 197
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
L + + DKI F P + FKD
Sbjct: 198 LYCHGDYDKIHFFPSYWFKD 217
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FFLF +++I
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 78.2 bits (184), Expect = 2e-13
Identities = 48/140 (34%), Positives = 64/140 (45%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+FFI +YLHI G+++ S+ LK V + YVL Q+SFW A VIT+
Sbjct: 86 LFFIFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITS 145
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLS IP G +V I GF V ATL F+ TGS +
Sbjct: 146 LLSVIPIWGPTIVTWIWSGFGVTGATLKFFFVLHFLLPWAILVIVLGHLIFLHSTGSTSS 205
Query: 618 LGLNRNLDKIPFHPFFTFKD 677
L + + DK+ F P + KD
Sbjct: 206 LYCHGDYDKVCFSPEYLGKD 225
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FF+F +++I
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/60 (58%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FF+ F+++
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 597 QTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
+TGSNNP GLN + DKIPFHP++T KDL
Sbjct: 121 ETGSNNPTGLNSDADKIPFHPYYTIKDL 148
Score = 38.7 bits (86), Expect = 0.13
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL 320
+FFIC++LH+G G+YY S+N+
Sbjct: 70 MFFICLFLHVGRGVYYGSYNM 90
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 76.6 bits (180), Expect = 5e-13
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 434
FF+ +YLH+ G+ Y S+ + V + Y+LP GQ+S+WGA VI
Sbjct: 111 FFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIV 170
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGSN 611
NL SAIP++G L I G + V +ATL RF++ GSN
Sbjct: 171 NLFSAIPFIGPDLALLIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSN 230
Query: 612 NPLGL------------NRNLDKIPFHPFFTFKDL 680
NP G+ LD +PFHP++T D+
Sbjct: 231 NPDGIEIKGPGKPVDEHGHPLDGVPFHPYYTVHDI 265
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS F F +Y+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAF-FVVVYL 117
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/59 (57%), Positives = 48/59 (81%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+CLIIQI+TG+FL ++YT ++++AF V +I R+VNYG +IR LHAN ASFF F F+Y+
Sbjct: 38 VCLIIQILTGVFLAMHYTPSVDLAFISVEHIMRDVNYGWLIRYLHANTASFF-FIFVYL 95
Score = 32.7 bits (71), Expect = 8.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESF 314
FFI +YLHIG G+YY S+
Sbjct: 89 FFIFVYLHIGRGLYYGSY 106
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 76.2 bits (179), Expect = 7e-13
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FFI IYLH+ G+ S+ + + + Y+LP GQ+S+WGA VI
Sbjct: 97 MFFIVIYLHMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVI 156
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
NL +A+P +G L + G F + +ATL RF+ GSN
Sbjct: 157 VNLFAAVPVVGEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSN 216
Query: 612 NPLGL--------NRNLDK-----IPFHPFFTFKDL 680
NP G+ NR DK IPFHP++T KDL
Sbjct: 217 NPDGIEIKEGPKGNRWSDKAPADGIPFHPYYTVKDL 252
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS F F IY+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMF-FIVIYL 104
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+ F C+Y+HIG ++Y S+ + + L YVLP GQ+S+WGATVI
Sbjct: 101 MLFACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVI 160
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
N + AIP +G L + GG + N L R + SN
Sbjct: 161 LNAVHAIPLIGQPLSELLLGGDTLGNVALHRLFVLHFTMAFAILGVIALHVAALHVVKSN 220
Query: 612 NPLGLN--RNLDKIPFHPFFTFKD 677
NP G++ +PFHP++T +D
Sbjct: 221 NPSGVDPVNPSQTLPFHPYYTSRD 244
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+ I +GLFL I YT +I AF V I R V G IR+LH G + LFA +YI
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVT-MLFACLYI 108
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 72.9 bits (171), Expect = 6e-12
Identities = 48/134 (35%), Positives = 62/134 (46%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITN 437
+ F+ YLHI G+ Y L + YVLP GQ+S+WGATVITN
Sbjct: 84 LVFLLTYLHILRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITN 143
Query: 438 LLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 617
LLS+IP + V I GG+ V + T+ RF+ GS NP
Sbjct: 144 LLSSIP----VAVIWICGGYTVSDPTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGSTNP 199
Query: 618 LGLNRNLDKIPFHP 659
LG + L KIPF+P
Sbjct: 200 LGYDTAL-KIPFYP 212
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 285
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS FL +++I
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 72.5 bits (170), Expect = 9e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 264
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVIT 434
FF+ +++H+ G+YY S+ V L Y GQ+S WGATVIT
Sbjct: 89 FFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVIT 148
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDN 509
NL SAIP++G +V+ + GGF +++
Sbjct: 149 NLFSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 72.5 bits (170), Expect = 9e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 264
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
S IFF+ +Y+HIG +YY S+ + V Y+LP Q+S+W ATV+
Sbjct: 77 SIIFFL-VYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVL 135
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 608
T+++ ++P +G ++ + + GGF+V TL R + Q+GS
Sbjct: 136 TSIILSVPVVGGLIFSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGS 195
Query: 609 NNPLGL-NRNLDKIPFHPFFTFKDL 680
+PL N D + FH + T KDL
Sbjct: 196 TSPLFFYNGYSDCVYFHSYHTIKDL 220
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 69.7 bits (163), Expect = 6e-11
Identities = 50/143 (34%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 428
SF+F ++LH+G ++Y S F YVLP GQ+SFWGATV
Sbjct: 95 SFVFLF-LFLHLGRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATV 153
Query: 429 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 608
ITNLLS P L+ + GG+ V + TL RF+ S
Sbjct: 154 ITNLLSPFP----SLIEWVSGGYCVHSPTLKRFFLFHYQLPFLVCGFSILHLFYLHFLSS 209
Query: 609 NNPLGLNRNLDKIPFHPFFTFKD 677
NNPL + N +KIPF P KD
Sbjct: 210 NNPLRNSTN-NKIPFFPLIFDKD 231
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/60 (40%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 285
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF FLF F+++
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 69.7 bits (163), Expect = 6e-11
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 219 WLNNSNITC*WSFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP* 398
WL S + SF+FF+ +++H GI SF L + YVLP
Sbjct: 70 WLVRSIHSNTASFVFFL-MFMHFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPW 128
Query: 399 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 578
GQ+SFWGATVI NLLS +PY G +LV + GGF V AT + F+
Sbjct: 129 GQMSFWGATVIINLLSILPY-GKMLVVWLWGGFYVSAATCSFFFALHYIVPFAVLVVIMV 187
Query: 579 XXXXXXQTGSNNPLGLNRNLD-KIPFHPFFTFKDL 680
+GS++ G+N + K+ F F+ KD+
Sbjct: 188 HLFFLHFSGSSSFGGMNYSDSLKVKFGLLFSLKDM 222
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 270
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFF 85
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FFI +YLH+ G+ Y S + V + YVLP GQ+SFWGA VI
Sbjct: 103 LFFIGVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVI 162
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQ-TGS 608
+L AIP +G L I G + + TL RF+ + GS
Sbjct: 163 ISLFGAIPVIGNGLDEWIMGDYLPSDVTLNRFFALHVIALPLLLGFLVVLHLVALRGVGS 222
Query: 609 NNPLGLN-------------RNLDKIPFHPFFTFKDL 680
NNP G++ ++ D IPFHP++T K++
Sbjct: 223 NNPDGIDIHQGPKGNRWDSMQSADSIPFHPYYTLKEM 259
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 285
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS F F +Y+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLF-FIGVYL 110
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+FF +Y+H+ G+YY S+ + V L Y L GQ+S+W A VI
Sbjct: 104 LFFAALYIHMFRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVI 163
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
T L S +P++G + + GGFA + AT+ RF+ + GS
Sbjct: 164 TGLFSVVPFVGEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSG 223
Query: 612 NPLGL--NRNLDKIPFHPFFTFKD 677
NP G+ + + +P P++ KD
Sbjct: 224 NPTGIEVKKAEEVVPMQPYYIAKD 247
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 285
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS F FA +YI
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLF-FAALYI 111
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+ F+ IY+H+ GIYY S+ + + + Y+LP GQ+S+W A VI
Sbjct: 100 VVFLVIYIHMFTGIYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVI 159
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
TNL IP++G LV I G F V + TLTRF+
Sbjct: 160 TNLFGGIPFIGDDLVVWIRGNFYVSDPTLTRFF 192
Score = 41.1 bits (92), Expect = 0.024
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 121 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 285
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS +F IYI
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAAS-VVFLVIYI 107
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLK--YV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 434
FF +YLHIG G+YY S+ YVLP GQ+S WGATVIT
Sbjct: 89 FFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVIT 148
Query: 435 NLLSAIPYLGTILVN*I*GGFAVD 506
NL+SAIP++G +V I GG D
Sbjct: 149 NLMSAIPWIGQDIVEFIWGGLYTD 172
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K+ P+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF
Sbjct: 5 KSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNS 64
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
V +I R+VN G ++R LH+N AS FF +++I
Sbjct: 65 VEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 66.1 bits (154), Expect = 7e-10
Identities = 36/85 (42%), Positives = 46/85 (54%)
Frame = +3
Query: 423 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 602
TVITNLLS+IP G ++V I GG++V N TL RF++
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 603 GSNNPLGLNRNLDKIPFHPFFTFKD 677
GS NPLGL + DKI F+P+F KD
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLKD 85
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/78 (44%), Positives = 44/78 (56%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 440
FF +YLHIG G+YY S+ YVLP GQ+S WGATVITNL
Sbjct: 89 FFFLVYLHIGRGLYYASYRAPRT------------LAWVSLYVLPYGQMSLWGATVITNL 136
Query: 441 LSAIPYLGTILVN*I*GG 494
+SAIP++G +V + GG
Sbjct: 137 ISAIPWIGQDIVEFVWGG 154
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K+ P+ K++N A+CLIIQI+TG+ L ++Y ++ AF
Sbjct: 5 KSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNS 64
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ +I R+VN G +IR LH+N AS FF +++I
Sbjct: 65 IEHIMRDVNNGWLIRYLHSNTASAFFFLVYLHI 97
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 498 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT-GSNNPLGLNRNLDKIPFHPFFTFK 674
+V+NATL RF+ T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
Query: 675 DL 680
DL
Sbjct: 268 DL 269
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 KNTPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYR 189
K+ P+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 190 VNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ +I R+VN G ++R LH+N AS FF +++I
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
+ FI +Y H+ G+ Y S + V + YVLP G +S+W VI
Sbjct: 93 LIFILLYTHMFRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVI 152
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGS 608
T+++ A+P +G L GG + +ATL R + GS
Sbjct: 153 TSIMHALPVVGPSLTTLTRGGPGIGSATLQRLLALHVVLFFLIILAAIALHIVALHRVGS 212
Query: 609 NNPLGLN---------RNLDKIPFHPFFTFKDL 680
NNP G++ + LD +PFHP++T KDL
Sbjct: 213 NNPDGIDIKKHKGPDGKPLDGVPFHPYYTVKDL 245
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 62.5 bits (145), Expect = 9e-09
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -3
Query: 266 KKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDPIF 87
KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 86 HQEEILDGLGKSINELLMI 30
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/143 (30%), Positives = 60/143 (41%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
SF FF +++HI G++Y S + + YVLP GQ+SFWGATVI
Sbjct: 78 SFYFFF-MFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVI 136
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 611
+NLL I GGF V TL RF+ + GS+
Sbjct: 137 SNLLEWFGKAKVITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSS 192
Query: 612 NPLGLNRNLDKIPFHPFFTFKDL 680
NPL L + + F+ F D+
Sbjct: 193 NPLTLAEAVALLKFYQLILFSDV 215
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 60.5 bits (140), Expect = 4e-08
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 20/79 (25%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAF--------------------YRVNYICRNVNYG*I 228
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 229 IRTLHANGASFFLFAFIYI 285
+R LHANGASFF F IY+
Sbjct: 63 LRNLHANGASFF-FICIYL 80
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESF 314
FFICIYLHIG G+YY SF
Sbjct: 74 FFICIYLHIGRGMYYGSF 91
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 59.7 bits (138), Expect = 6e-08
Identities = 24/53 (45%), Positives = 41/53 (77%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 267
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS FL
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFL 82
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/94 (35%), Positives = 43/94 (45%)
Frame = +3
Query: 399 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 578
GQ+SFWG + AI +G V GF+VD TL +
Sbjct: 129 GQMSFWGXXXXXSXXXAIXXVGDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLL 188
Query: 579 XXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
Q GSNNPLG++ +DKI +P+F KDL
Sbjct: 189 HLAALHQYGSNNPLGVHSEMDKIAPYPYFYVKDL 222
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXX--YVLP*GQISFWGATVI 431
+FF YLHI +YY + Y+ + Y L GQ S+W ATVI
Sbjct: 87 LFFFACYLHIFRAMYYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVI 146
Query: 432 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
T AIP++G L + + GG+A TL RFY
Sbjct: 147 TGFTRAIPWVGDTLYSFLVGGYAPGTPTLGRFY 179
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 121 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFA 273
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS F FA
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFA 91
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +3
Query: 411 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 575
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 576 XXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
+ GS+NPL N K+ F P+ KD+
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPYNGVKDM 96
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 237
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 254 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 388
+H L + T+ T+ LL I L + +W+Y I +S CFHR+C
Sbjct: 56 IHLLPLPVCTHWTKYLLWILPLLRNLKHWHYTTINYHSYCFHRIC 100
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/70 (44%), Positives = 37/70 (52%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
S +FF+ YLHI G+ Y L + YVLP GQ+S+WGATVI
Sbjct: 249 SLVFFLT-YLHILRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVI 307
Query: 432 TNLLSAIPYL 461
TNLLS IP L
Sbjct: 308 TNLLSGIPAL 317
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 285
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F +++I
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +3
Query: 489 GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFT 668
GGF+V ATL RF++ + GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 669 FKDL 680
KD+
Sbjct: 66 LKDV 69
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWG 419
FFICIYLHIG G+YY S+ K YVLP GQ+SFWG
Sbjct: 56 FFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFWG 108
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N S FF+ F++I
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHI 94
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 48.8 bits (111), Expect = 1e-04
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Frame = +3
Query: 261 FFICIYLHIGLGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 434
F +YLH+ GIYY ++ + V + Y+LP GQ+S+WG V T
Sbjct: 97 FMAIVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTT 156
Query: 435 NL---LSAIPYLGTI-------LVN*I*GGFAVDNATLTR-FYTXXXXXXXXXXXXXXXX 581
+ L+ P L I +V + GG+ V + TL R F +
Sbjct: 157 EIPGSLADAPILKPIFKAIAETIVLWMKGGYVVTDVTLGRVFGSHVLIYPLILLALVGIH 216
Query: 582 XXXXXQTGSNNPLGL----NRNLDK-IPFHPFFTFKD 677
G +NP G+ +N DK +PFHP+ T K+
Sbjct: 217 LYLVRAAGISNPEGIEYDKKKNPDKFVPFHPYMTLKE 253
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FF+ ++++
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+SFW TV TN AIP +G LV + GG V TL RF+
Sbjct: 140 YLLPWSQLSFWATTVATNSAGAIPVIGGYLVEFLRGGKLVGPPTLGRFF 188
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 121 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 267
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMV 98
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2
Query: 254 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNY 433
L+ +L T+R+R LL + + + +Y Y ++N FH L +R NI LG N N+
Sbjct: 45 LYALHLPFPTHRSRPLLWLISPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNH 104
Query: 434 KSIICNPLFRN 466
K I NP++RN
Sbjct: 105 KPTISNPVYRN 115
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 48.0 bits (109), Expect = 2e-04
Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 252 SFIFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 431
SF+F I YLHI G+ Y L + YVLP GQ+SFW TVI
Sbjct: 83 SFVF-ILTYLHILRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVI 141
Query: 432 TNLLSAIPYL-GTILVN*I*GGFAVDNATLTRFY 530
TNLL YL T ++ GG+ V + TL RF+
Sbjct: 142 TNLL----YLFRTCFMD--CGGYLVSDPTLKRFF 169
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 285
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF F+ +++I
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+++W TV TN+ SA+P +G + + GG +D TL RFY
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 112 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 279
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS + I
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMI 98
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
Y LP QI +W ++T + AIP +G+ LV + G +V +TLTRFY+
Sbjct: 136 YSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYS 185
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 267
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS +
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVI 102
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +3
Query: 201 LPKCKLWLNNSNITC*WSFIFFICIYLHIGLGIYYESFNL 320
LP+ KLWL+ S + + +FF+C+++HIG G+YY SF L
Sbjct: 6 LPRRKLWLSYSLPSRNGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/86 (32%), Positives = 41/86 (47%)
Frame = +3
Query: 423 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 602
+V TN LS +PYLG L+ I GG V ++ RF++ +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 603 GSNNPLGLNRNLDKIPFHPFFTFKDL 680
S+NPL +N N D + F P+F KD+
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSKDI 87
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Frame = +3
Query: 258 IFFICIYLHIGLGIYYESFNLKYV*LXXXXXXXXXXXXXXXX-YVLP*GQISFWGATVIT 434
+ FIC+ HIG G+YY S++ V Y+LP Q+S+W VI+
Sbjct: 101 LVFICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVIS 160
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNN 614
+ ++P +G L + + G + + +R + + GS+N
Sbjct: 161 TIFLSLPVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVIIALIVLHLVNLHKIGSSN 220
Query: 615 PLGLNRNL-DKIPFHPFFTFKDL 680
+ D I FH + +KD+
Sbjct: 221 SFNSGDSYSDVIFFHXGYGYKDV 243
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ L F+++
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+S+W + + ++P +G + + GG V L+RFY
Sbjct: 134 YLLPYEQLSYWASVIGAETAGSLPVVGATMKIMMQGGIKVTAEMLSRFY 182
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 603 GSNNPLGLNRNLDKIPFHPFFTFKDL 680
GS+NPLG++ N D+IP HP++ FKDL
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFKDL 27
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 435 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
YVLP +S+WG TV +N+L+ +P +GT L I G +++ TL + +
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF+ +++
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.032
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 219
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 40.3 bits (90), Expect = 0.042
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q +W V T L+ IP +G L + GG +ATLTRF+
Sbjct: 136 YLLPWDQKGYWATKVATTLMGLIPAIGGDLQKVVVGGTDYGHATLTRFF 184
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 243
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLH 86
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
Y+LP Q+++W V +N+ P +GT + + G+ + ATL R+YT
Sbjct: 158 YLLPWDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP + ++WG V TN++ +P +G +L + I GG + TL+ F+
Sbjct: 146 YLLPWDERAYWGTIVGTNMIGLVPVVGPLLKSAIRGGSGLGALTLSHFF 194
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFL 267
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMV 104
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 39.9 bits (89), Expect = 0.056
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = +3
Query: 405 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXX 584
+SFWGAT T + Y + + G F D ATL F++
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 585 XXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDL 680
Q GSNNPLG++ LDKI F+P+ K+L
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPYCFVKNL 84
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 39.5 bits (88), Expect = 0.074
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 178 AFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYISD*EFTMN 309
AF V YI VNYG I R H NGAS FF+F +++I F M+
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMS 46
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 39.1 bits (87), Expect = 0.098
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 254 LHFFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 415
++ FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 59 INIFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 455 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 559
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 109 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 279
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ L +
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVV 98
Score = 35.9 bits (79), Expect = 0.91
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+ +W A + T +L +IP +G L+ G + + TL RF+
Sbjct: 136 YLLPLDQVGYWAAIIGTKILGSIPIVGDQLLLLGQAGTKITDHTLMRFF 184
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 37.9 bits (84), Expect = 0.23
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 111 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFICIYL 281
+ N N +W + + LH ++ N F +LP+CKL L +S TC W I + +YL
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWR-ILLLHLYL 62
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q+++W + + +IP +G + + GGF++ ATL R Y
Sbjct: 191 YLLPWDQLAYWAGQIGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 37.1 bits (82), Expect = 0.40
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 408 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
S+WG +V + +P+ G +V+ I GG + + TL+RF+T
Sbjct: 151 SYWGVSVAVSAAGRVPFAGPSIVHLILGGEYIGSETLSRFFT 192
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 36.7 bits (81), Expect = 0.52
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 279
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F + I
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVI 139
Score = 36.7 bits (81), Expect = 0.52
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q++FW T+ +++ A P +G + + GG + L RFY
Sbjct: 177 YLLPWDQLAFWAVTIGSSMADAAPGVGPAIGRLLRGGAEIGAGALLRFY 225
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 36.7 bits (81), Expect = 0.52
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 285
IIQI+TGL L YY AF +I V +G +IR +HA A+ L FI++
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHM 174
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 36.3 bits (80), Expect = 0.69
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 115 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 267
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F +
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLM 106
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+L Q FW + V + S P+LG + + + GG V ATL+RF+
Sbjct: 148 YLLRWDQDGFWASVVGIKIGSYSPFLGPYITHFLLGGDVVGPATLSRFF 196
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 36.3 bits (80), Expect = 0.69
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 402 QISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Q ++WG + +++S +P LG LV + GG + ATL+RF+
Sbjct: 146 QDAYWGLGIGASIVSRVPLLGPWLVTLVLGGPIIAGATLSRFF 188
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 267
++Q++TG+ L + Y + A+ + + +++ G IR LH G++F +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMI 98
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 36.3 bits (80), Expect = 0.69
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 390 LP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
LP Q +W + T + +P +G+ L + + GG N TLTR YT
Sbjct: 142 LPWDQKGYWSYQIETGIAGTMPVIGSTLRSLVVGGSEFGNLTLTRLYT 189
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 36.3 bits (80), Expect = 0.69
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 533
Y LP +S+WG TV +N+L+ IP +G + I +++ TL + ++
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIGIYICQWIWCSEFINDFTLLKLHS 182
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 387 VLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
+LP Q +W V +++S+IP +G + + + GG TLTRFY
Sbjct: 141 LLPWDQKGYWTTQVRNSIISSIPVVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 302
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 213 KLWLNNSNITC*WSFIFFICIYLHIG 290
KLW+ S+ITC WS + F IY H G
Sbjct: 259 KLWIRYSSITCTWSNLKFYSIYRHTG 284
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 422 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 538
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q +W V T ++ +P G + + + GG N T+TRFY
Sbjct: 136 YLLPWDQKGYWATQVATGIMGTVPG-GEPMQHALQGGDQYGNLTITRFY 183
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.7
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1
Query: 451 IADNRFVITVAPQKDI*PQGKT 386
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 530
Y+LP Q++FW TV T++ P +G + + G V L RFY
Sbjct: 172 YLLPWDQLAFWAITVGTSIAGYAPVVGQDIKFLLLGDATVGQEALLRFY 220
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLG 464
Y+LP Q+ FW TV TN+ A P LG
Sbjct: 173 YLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/98 (24%), Positives = 36/98 (36%)
Frame = +3
Query: 384 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 563
Y+LP ++WG V T + + P +G L + G +V T RFY
Sbjct: 140 YLLPWDNRAYWGTVVATKIAAQAPVVGPYLSRLLGGEGSVGVVTFARFYGLHVLLLPPAT 199
Query: 564 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKD 677
+ P+ + L K F+P FKD
Sbjct: 200 IFLVILHVFLVRKHGVAPVPGDELLPKKQFYPAQVFKD 237
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 33.1 bits (72), Expect = 6.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 606 SNNPLGLNRNLDKIPFHPFFTFKDL 680
S+NPLG+N N+D I +P+ KD+
Sbjct: 38 SSNPLGMNNNIDLITLNPYSIMKDM 62
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 8.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 214 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 71
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 118 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 279
I+++ITG + +YYT + + Y+ V YG + +LH+ GA +F +
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLL 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,882,730
Number of Sequences: 1657284
Number of extensions: 9154419
Number of successful extensions: 17109
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 16353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17010
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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