Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0309
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1817|AAF48207.2|  633|Drosophila melanogaster CG4661-PA...    30   2.2  
AY051684-1|AAK93108.1|  425|Drosophila melanogaster LD23523p pro...    29   6.8  
AE014134-2916|AAF53656.1|  425|Drosophila melanogaster CG7200-PA...    29   6.8  
AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p pro...    28   8.9  
AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-P...    28   8.9  

>AE014298-1817|AAF48207.2|  633|Drosophila melanogaster CG4661-PA
           protein.
          Length = 633

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 170 YDTKYLSLKNNKNSTLHTIEIKNDTLGNLTKNNSRY 63
           Y+     ++NN+N+   + + KNDT+   TK N  Y
Sbjct: 387 YNPNIQLIQNNENTNKSSRDCKNDTINEFTKVNGNY 422


>AY051684-1|AAK93108.1|  425|Drosophila melanogaster LD23523p
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -2

Query: 332 NYNKSLNVSM----LNNNVKLVCNNFPNCYFIDYF 240
           N+    N+SM    L NN+K VCN   +C  +D F
Sbjct: 298 NWFNGCNISMVWQNLKNNLKAVCNEISDCQQMDNF 332


>AE014134-2916|AAF53656.1|  425|Drosophila melanogaster CG7200-PA
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -2

Query: 332 NYNKSLNVSM----LNNNVKLVCNNFPNCYFIDYF 240
           N+    N+SM    L NN+K VCN   +C  +D F
Sbjct: 298 NWFNGCNISMVWQNLKNNLKAVCNEISDCQQMDNF 332


>AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p
           protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 515 VTKPFASSEEVFKCCENLNLNKDDKLVIGVGENDTNPFKLLIELSATL 372
           V  PFA + + F  C  +NL+  D  +  V  NDT    L ++  A L
Sbjct: 207 VLVPFAGNLKSFSSCVKMNLDLPDWTLELVATNDTRRCDLFLQKHAIL 254


>AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-PA
           protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 515 VTKPFASSEEVFKCCENLNLNKDDKLVIGVGENDTNPFKLLIELSATL 372
           V  PFA + + F  C  +NL+  D  +  V  NDT    L ++  A L
Sbjct: 207 VLVPFAGNLKSFSSCVKMNLDLPDWTLELVATNDTRRCDLFLQKHAIL 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,588,274
Number of Sequences: 53049
Number of extensions: 353485
Number of successful extensions: 1087
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)