Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0309
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.60
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.79
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.79
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.79
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 1.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 1.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 1.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 1.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 1.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 1.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 1.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.8
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 22 4.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.60
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 299 NNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYIIDSID 171
NNN K NN N Y + + ++YN N C+K+ Y I +I+
Sbjct: 326 NNNYKYNYNN--NNYNNNNYNNNYNNN----CKKLYYNIINIE 362
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYI 186
+S L+N K + NN N Y +Y ++YN N + INYI
Sbjct: 82 ISSLSN--KTIHNN--NNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYI 186
+S L+N K + NN N Y +Y ++YN N + INYI
Sbjct: 82 ISSLSN--KTIHNN--NNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYI 186
+S L+N K + NN N Y +Y ++YN N + INYI
Sbjct: 82 ISSLSN--KTIHNN--NNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 311 VSMLNNNVKLV-CNNFPNCYFIDYFGSSYNKNKYIICQKINYIID 180
+S L+NN K NN+ N Y +Y ++YN N Y K NYII+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNY-NNNYN-NNYKKLYK-NYIIN 123
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 311 VSMLNNNVKLV-CNNFPNCYFIDYFGSSYNKNKYIICQKINYIID 180
+S L+NN K NN+ N Y +Y ++YN N Y K NYII+
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNY-NNNYN-NNYKKLYK-NYIIN 123
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 320 SLNVSMLNNNVK-LVCNNFPNCYF-IDY 243
S N + NNN K L CNN+ Y+ I+Y
Sbjct: 86 SNNYNYNNNNYKKLYCNNYKKLYYNINY 113
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKN 219
+S L+NN NN+ Y +Y YN N
Sbjct: 82 ISSLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 320 SLNVSMLNNNVK-LVCNNFPNCYF-IDY 243
S N + NNN K L CNN+ Y+ I+Y
Sbjct: 86 SNNYNYNNNNYKKLYCNNYKKLYYNINY 113
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKN 219
+S L+NN NN+ Y +Y YN N
Sbjct: 82 ISSLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.2 bits (50), Expect = 1.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYIIDSID 171
+S L+N NN+ N + +Y +YN N Y +K+ Y I+ I+
Sbjct: 82 ISSLSNKTIHNNNNYNNNNYNNY---NYNNNNYNNYKKLYYNINYIE 125
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 320 SLNVSMLNNNVK-LVCNNFPNCYF-IDY 243
S N + NNN K L CNN+ Y+ I+Y
Sbjct: 86 SNNYNYNNNNYKKLYCNNYRKLYYNINY 113
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKN 219
+S L+NN NN+ Y +Y YN N
Sbjct: 82 ISSLSNNYNYNNNNYKKLYCNNYRKLYYNIN 112
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 290 VKLVCNNFPNCYFIDYFGSSYNKNKYIICQ--KINYI 186
+ + NN+ + +Y ++YN N Y Q INYI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 290 VKLVCNNFPNCYFIDYFGSSYNKNKYIICQ--KINYI 186
+ + NN+ + +Y ++YN N Y Q INYI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 290 VKLVCNNFPNCYFIDYFGSSYNKNKYIICQ--KINYI 186
+ + NN+ + +Y ++YN N Y Q INYI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 290 VKLVCNNFPNCYFIDYFGSSYNKNKYIICQ--KINYI 186
+ + NN+ + +Y ++YN N Y Q INYI
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 236 SSYNKNKYIICQKINYIIDSIDYDTKYLSLKNNK 135
S + K+ + +K+NY+ S+D + LK NK
Sbjct: 230 SQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNK 263
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 311 VSMLNNNVKLVCNNFPNCYFIDYFGSSYNKNKYIICQKINYI 186
+S L+N + + NN N Y +Y ++YN N + INYI
Sbjct: 82 ISSLSN--RTIHNN--NNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 89 YLKYHFLFQLCVTYYFYCFSMTSI 160
+ YHF F L +T F F I
Sbjct: 2 FKNYHFFFILVITLIFLYFGEADI 25
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 109 ISIVCNVLFLLFFNDKY 159
I+ V NVL+ + NDKY
Sbjct: 75 INDVLNVLYFINKNDKY 91
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 413 YHSLQHQ*QACHPYLSSNFHN 475
YH QH HP+ S+ H+
Sbjct: 316 YHPHQHHPSQYHPHRGSSPHH 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,977
Number of Sequences: 438
Number of extensions: 3343
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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