Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0308
(527 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 236 2e-61
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 178 7e-44
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 165 6e-40
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 127 1e-28
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 126 2e-28
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 122 4e-27
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 120 2e-26
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 116 3e-25
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 116 4e-25
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 116 4e-25
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 114 1e-24
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 114 1e-24
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 113 3e-24
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 105 8e-22
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 103 3e-21
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 99 3e-20
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 89 8e-17
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 86 4e-16
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 66 6e-10
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 60 2e-08
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 56 7e-07
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 55 9e-07
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 55 1e-06
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 55 1e-06
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 54 3e-06
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 53 4e-06
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 53 5e-06
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 52 8e-06
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 52 1e-05
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 51 1e-05
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 49 8e-05
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 49 8e-05
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 49 8e-05
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 48 1e-04
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 48 1e-04
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 48 1e-04
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 48 1e-04
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 48 1e-04
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 48 2e-04
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 48 2e-04
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 47 2e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 47 2e-04
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 46 4e-04
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 46 5e-04
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 46 7e-04
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 44 0.002
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 42 0.007
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 42 0.009
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 41 0.015
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 41 0.015
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 40 0.027
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 40 0.035
UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium... 40 0.047
UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole gen... 40 0.047
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 39 0.062
UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|R... 34 1.8
UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas ... 34 1.8
UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 1.8
UniRef50_Q4CAU9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q8IB15 Cluster: Putative uncharacterized protein MAL8P1... 33 3.1
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 4.1
UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga br... 33 5.4
UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria ten... 33 5.4
UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma ... 32 7.1
UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces cere... 32 9.4
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 236 bits (578), Expect = 2e-61
Identities = 110/139 (79%), Positives = 122/139 (87%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 191
KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K+LR+AKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKE 66
Query: 192 APPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPV 371
APP EKPE+VKTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPV
Sbjct: 67 APPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPV 126
Query: 372 KHGRPGIGATHSSRFIPLK 428
KHGRPGIGATHSSRFIPLK
Sbjct: 127 KHGRPGIGATHSSRFIPLK 145
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 178 bits (433), Expect = 7e-44
Identities = 85/138 (61%), Positives = 104/138 (75%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 194
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 195 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 374
P NEKP V+TH+RNMIIVPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+
Sbjct: 68 PENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVR 127
Query: 375 HGRPGIGATHSSRFIPLK 428
HGR GAT +SRFIPLK
Sbjct: 128 HGR--AGAT-TSRFIPLK 142
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 165 bits (401), Expect = 6e-40
Identities = 82/144 (56%), Positives = 103/144 (71%), Gaps = 6/144 (4%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 194
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 195 PPNEK--PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKP 368
K PE+VKTHLRNMIIVPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKK 136
Query: 369 VKHGRPGIGA----THSSRFIPLK 428
V H RP I S+RFIPL+
Sbjct: 137 VNHHRPRICGCCCFRRSTRFIPLR 160
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 127 bits (307), Expect = 1e-28
Identities = 60/134 (44%), Positives = 89/134 (66%)
Frame = +3
Query: 27 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 206
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREG---K 65
Query: 207 KPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 386
+ +KTH+R+MII+PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG P
Sbjct: 66 YSKTIKTHVRDMIILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEP 125
Query: 387 GIGATHSSRFIPLK 428
G+ AT SS F+ +K
Sbjct: 126 GLKATRSSLFLAMK 139
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 126 bits (305), Expect = 2e-28
Identities = 63/143 (44%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 ETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRA 182
E KKKR FR++TYRGV +++L MP ++ +L GL + + L+K A
Sbjct: 7 EVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAA 66
Query: 183 KKEA-PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
K + KPE+V+TH R+ II P M+G++VG++ G + VEIKPEM+G L +F+ T
Sbjct: 67 KAACVSSSSKPEMVRTHARSAIIWPAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPT 126
Query: 360 YKPVKHGRPGIGATHSSRFIPLK 428
KHGRPGIGA+ SS+F+PLK
Sbjct: 127 RVTPKHGRPGIGASSSSKFVPLK 149
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 122 bits (295), Expect = 4e-27
Identities = 62/139 (44%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Frame = +3
Query: 15 KKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 191
++R + +RGV++++L M + L +L GL K + V KLR ++
Sbjct: 8 RRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR-LRRA 66
Query: 192 APPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPV 371
A P++KP+IV+THLR+MII PEM+G V +YNG+ F VEIKP M+G L E+S++YK V
Sbjct: 67 AQPSQKPKIVRTHLRDMIIFPEMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIV 126
Query: 372 KHGRPGIGATHSSRFIPLK 428
HG+ GIGAT SS+F+PL+
Sbjct: 127 SHGKVGIGATRSSKFVPLR 145
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 120 bits (290), Expect = 2e-26
Identities = 58/132 (43%), Positives = 83/132 (62%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 212
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 213 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 392
++THLR+M ++PE VG +Y G+ F +VE++PEMIGHYLGEF +T V+HG+ GI
Sbjct: 71 --IRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGI 128
Query: 393 GATHSSRFIPLK 428
GAT SS+F+PLK
Sbjct: 129 GATRSSKFVPLK 140
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 116 bits (280), Expect = 3e-25
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Frame = +3
Query: 12 KKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVKKL 173
+KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+K+L
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRL 79
Query: 174 RRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 314
R+AKK APP EKPE+VKTH R+++++P MVGS VG+Y+GKTF QVE+
Sbjct: 80 RKAKKGAPPTEKPEVVKTHPRDVLLLPAMVGSTVGVYDGKTFKQVEM 126
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 116 bits (278), Expect = 4e-25
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 9/133 (6%)
Frame = +3
Query: 18 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 170
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 171 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 350
+RR+K++ P EKP VKTH R+MI++PE+VG IVG+YNGK F VE+K +MIG YL EF
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEF 124
Query: 351 SVTYKPVKHGRPG 389
++TYKP HG+ G
Sbjct: 125 AMTYKPTTHGKTG 137
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 116 bits (278), Expect = 4e-25
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 203
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 204 EKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
+P +VKTHLR+M+I+PE V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH +
Sbjct: 70 VRPPVVKTHLRHMVILPEFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSK 129
Query: 384 PGIGATHSSRFIPLK 428
G+GAT SS LK
Sbjct: 130 AGVGATRSSSATSLK 144
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 114 bits (275), Expect = 1e-24
Identities = 62/133 (46%), Positives = 86/133 (64%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 209
++FTY+G L+ L M E+L++++ L R+P KKL K E+ +
Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKILPARARRT----LLREPNYEQKKLME-KLESDEED- 81
Query: 210 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 389
VKTH+R++II+P VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG
Sbjct: 82 ---VKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPG 138
Query: 390 IGATHSSRFIPLK 428
+GAT SS+F+PLK
Sbjct: 139 VGATRSSKFMPLK 151
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 114 bits (274), Expect = 1e-24
Identities = 58/131 (44%), Positives = 85/131 (64%)
Frame = +3
Query: 36 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 215
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKV- 87
Query: 216 IVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIG 395
+++TH R+MII+PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+
Sbjct: 88 VIRTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLK 147
Query: 396 ATHSSRFIPLK 428
AT SS I K
Sbjct: 148 ATRSSLHIAAK 158
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 113 bits (271), Expect = 3e-24
Identities = 48/132 (36%), Positives = 81/132 (61%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 212
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 213 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 392
+++TH R+ +I PEM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+
Sbjct: 90 RVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGM 149
Query: 393 GATHSSRFIPLK 428
GAT S F+P+K
Sbjct: 150 GATRGSMFVPIK 161
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 105 bits (251), Expect = 8e-22
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +3
Query: 30 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 209
++F Y+G L +L M E+L ++M LK KKL + A +
Sbjct: 8 KEFRYKGYTLQELEQMSLEELAKIMPARQRRTLLRRLKFGWSDQQKKLFKKILLAKEGKY 67
Query: 210 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 389
+ +KTH RN II+P MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PG
Sbjct: 68 KKPIKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPG 127
Query: 390 IGATHSSRFIPLK 428
IGAT SS + K
Sbjct: 128 IGATRSSAHVSKK 140
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 103 bits (247), Expect = 3e-21
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 398
+KTH+RN II P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGA
Sbjct: 82 LKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGA 141
Query: 399 THSSRFIPLK 428
THSSRFIPL+
Sbjct: 142 THSSRFIPLR 151
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 99 bits (238), Expect = 3e-20
Identities = 50/132 (37%), Positives = 76/132 (57%)
Frame = +3
Query: 33 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 212
++TYRG + +L ++ E+ EL+ G ++ + + KK
Sbjct: 15 EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK-------- 66
Query: 213 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 392
++TH R+MII+PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+
Sbjct: 67 --IRTHHRDMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGV 124
Query: 393 GATHSSRFIPLK 428
GAT SS+F+PLK
Sbjct: 125 GATRSSKFVPLK 136
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 88.6 bits (210), Expect = 8e-17
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +3
Query: 204 EKP-EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 380
E P + +KTH R++ I+PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H
Sbjct: 98 ENPGKTIKTHCRSLYILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHT 157
Query: 381 RPGIGATHSSRFIPLK 428
PG+GAT SS+ + LK
Sbjct: 158 GPGVGATRSSKHVALK 173
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 86.2 bits (204), Expect = 4e-16
Identities = 52/89 (58%), Positives = 55/89 (61%)
Frame = -2
Query: 430 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTISG 251
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTISG
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTISG 67
Query: 250 TMIMFLK*VFTISGFSFGGASFLARRSFL 164
M M + V T+SGFS + LA RSFL
Sbjct: 68 MMGMLRRCVRTVSGFSIPTTAALALRSFL 96
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 65.7 bits (153), Expect = 6e-10
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 171 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGE 347
L+ + + P+E P+ + HL NMIIV EM+G IVG+YNGKT NQV I KP+ I HYL
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTS 70
Query: 348 FS 353
S
Sbjct: 71 LS 72
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
+K+ P + K L + + +EK ++KT+ R+ I+PEMV + +YNGKTF + I
Sbjct: 5 IKKGPF-IEKSLYQKVLSSFGSEKRVVIKTYSRSSTIIPEMVSLTISVYNGKTFIPIYIT 63
Query: 318 PEMIGHYLGEFSVT 359
+++GH LGEFS T
Sbjct: 64 EDLVGHKLGEFSPT 77
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +3
Query: 147 KPMALVKKLRR--AKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 320
+PM +L+R + ++A + + K R I+P+ VG+IV +YNGK F ++I
Sbjct: 23 RPMGEDTRLKREGSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITD 82
Query: 321 EMIGHYLGEFSVTYKPVK 374
EM+GH GEF+ T K K
Sbjct: 83 EMVGHKYGEFASTRKIAK 100
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 55.2 bits (127), Expect = 9e-07
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 177 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSV 356
R +K E+ ++V+T+ R I+PE VG + ++NGKTF V I +M+GH LGEF+
Sbjct: 143 RIRKMNETGER-KVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAP 201
Query: 357 T 359
T
Sbjct: 202 T 202
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +3
Query: 222 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
KT RN I+P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 25 KTWSRNSTIIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
LK+ P + L + + A ++KP +KT R +I+PEMVG + ++NGK V +
Sbjct: 5 LKKGPF-VDHHLAKKVESAAGSKKP--IKTWSRRSMILPEMVGITIAVHNGKNHIPVLVN 61
Query: 318 PEMIGHYLGEFSVTYKPVKHG 380
M+GH LGEF+VT HG
Sbjct: 62 ENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
++T R+ I+P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 35 IRTQARSATILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 53.2 bits (122), Expect = 4e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +3
Query: 213 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
++VKT+ R+ ++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 88 KVVKTYSRDSQVISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 195 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 353
PP +KT R+ I+P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 2 PPPPGTPAIKTQARSATILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 52.0 bits (119), Expect = 8e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
+KT +R+ I+P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 50 IKTAVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
LK+ P LR+ +K EK EI+ T R I+P M+G + I+NG+ V I
Sbjct: 5 LKKNPFVAKHLLRKIEKLNTKAEK-EIIITWSRASTIIPTMIGHTIAIHNGREHLPVYII 63
Query: 318 PEMIGHYLGEFSVT 359
M+GH LGEFS T
Sbjct: 64 DLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
LK+ P +++ + +A +EK +++KT R I P +G + +Y+G+ V I+
Sbjct: 5 LKKGPFVDEHLMKKVEAQAN-DEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQ 63
Query: 318 PEMIGHYLGEFSVT 359
+M+GH LGEF+ T
Sbjct: 64 EDMVGHKLGEFAPT 77
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 198 PNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 353
P ++ ++T R+ I+P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 71 PGKRVAPIRTQARSATILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 48.8 bits (111), Expect = 8e-05
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 156 ALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPE-MIG 332
++++ + RA K+ N+ ++K H R +I+P +G +YNGK + V + + MIG
Sbjct: 14 SVLRLVNRALKQGSINK---VIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIG 70
Query: 333 HYLGEFSVTYKPVKH 377
H GEFS T K H
Sbjct: 71 HKFGEFSPTRKFAGH 85
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 159 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 338
L+KK+ K+ K ++++T R I P+M+G + ++NGK + I EM+GH
Sbjct: 15 LLKKIEEIKQTG----KKKLIRTWSRRSTIFPDMIGMTISVHNGKQHIPIFIGDEMVGHK 70
Query: 339 LGEFSVT 359
LGEF T
Sbjct: 71 LGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
LK+ P + L++ +K +K + +T R I P M+G + ++NG+ V +
Sbjct: 5 LKKGPFIDLHLLKKVEKAVESGDKKPL-RTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVT 63
Query: 318 PEMIGHYLGEFSVT 359
EM+GH LGEF+ T
Sbjct: 64 DEMVGHKLGEFAPT 77
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = +3
Query: 183 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 362
K+ P +EK T R I P VG + IYNGK +IKPEM+GH LGEF T
Sbjct: 17 KRLTPEHEKKP---TWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTR 73
Query: 363 K 365
K
Sbjct: 74 K 74
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
L K + KL+R KK ++KT R+ IVP M+G I+ ++NG+ V I
Sbjct: 27 LTSKKQEKLVKLQRKKKII------SVIKTWSRSSTIVPLMIGEIIAVHNGREHIPVYIT 80
Query: 318 PEMIGHYLGEFSVT 359
EM+G LGEF+ T
Sbjct: 81 EEMVGFKLGEFATT 94
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 180 AKKEAPPNEKP--EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 353
AKK NE ++KT R ++ P+M+G +G+++G+ V + M+GH LGEF+
Sbjct: 16 AKKVTAQNEAGTHNVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFA 75
Query: 354 VT 359
T
Sbjct: 76 PT 77
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
++T+ R I+P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 33 IRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 222 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
K + R ++ P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 27 KIYSRRSVVSPKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 213 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 359
+I+K + R +I P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 22 KIIKIYSRRSVIYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
+K+ P+ L + +K+ K ++++T R+ I P VG + +YNG+ V I
Sbjct: 5 VKKGPIVASHLLAKIEKQKNLKNK-KVIQTWSRSSTITPIFVGHKIAVYNGREHIPVYIT 63
Query: 318 PEMIGHYLGEFSVT 359
M+GH LGEFS T
Sbjct: 64 ENMVGHKLGEFSPT 77
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +3
Query: 183 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 362
+K PP P I KT R I+P VG ++NGKT+ V I +M+G LGE+ T
Sbjct: 20 RKLPPPPGTPPI-KTQKRGATILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTR 78
Query: 363 K 365
K
Sbjct: 79 K 79
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +3
Query: 234 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
R I+PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 161 RRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 234 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 383
R I+P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 28 RRSCILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +3
Query: 234 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
R I+P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 76 RRSTILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +3
Query: 207 KPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 377
K + ++T R I+P+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 28 KKQPIQTDKRAATIIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 186 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 350
++ PP +KT R+ I+P VG ++NGK + V I EM+G LGE+
Sbjct: 25 RKLPPAPNTPPIKTQKRSATILPNFVGLRFSVHNGKNYQDVLITEEMVGRKLGEY 79
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 201 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 380
N+K I KT R I+P ++ VG+++G TF ++ M+G+ LGEF T + ++G
Sbjct: 23 NDKNVIYKTQARGSTILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYG 82
Query: 381 R 383
+
Sbjct: 83 K 83
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 42.3 bits (95), Expect = 0.007
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 159 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 338
L+ K+ + K+ N+K +I+ T R IVPEMVG ++NGK V I M+
Sbjct: 31 LLTKIEKLKR----NKKQKIIITWSRASTIVPEMVGYTFAVHNGKEHLPVYITENMLYQK 86
Query: 339 LGEFSVT 359
LG+F+ T
Sbjct: 87 LGDFAPT 93
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 41.9 bits (94), Expect = 0.009
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +3
Query: 201 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
N + + +K +N++I+P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 17 NNQKKWIKIFNKNLVIMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +3
Query: 141 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 320
K P L + +K EK IV T R I+P MVG + I+NGK + I
Sbjct: 5 KTNPFVAHHLLAKIEKVNMKEEKETIV-TWSRASSILPAMVGHTIAIHNGKEHIPIYITN 63
Query: 321 EMIGHYLGEFSVT 359
M+G LGEF T
Sbjct: 64 PMVGRKLGEFVPT 76
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 41.1 bits (92), Expect = 0.015
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 141 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 320
K+ P + K N K ++V T R+ + P MVG + +YNGK + I
Sbjct: 6 KKSPFISYRLFNTIDKMNLKNLK-QLVFTKSRSSTVFPSMVGHNISVYNGKNYVPFLILN 64
Query: 321 EMIGHYLGEFSVT 359
+MI LGEFS T
Sbjct: 65 QMISSKLGEFSRT 77
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 40.3 bits (90), Expect = 0.027
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
++ + R+ IVP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 58 IQVYQRSSTIVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 39.9 bits (89), Expect = 0.035
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 210 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 389
P IV T R+ +IVP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 24 PTIVTTE-RSSVIVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
>UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium x
hortorum|Rep: Ribosomal protein S19 - Pelargonium
hortorum (Common geranium)
Length = 124
Score = 39.5 bits (88), Expect = 0.047
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 138 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 317
+KR P L++ +K +K + +KT R I+P M+G + I+NG+ + I
Sbjct: 16 VKRNPFVANPLLKKIEKLNAKAQK-DFLKTWSRASTIIPAMIGYTIYIHNGREHVPIPIT 74
Query: 318 PEMIGHYLGEFSVT 359
M+ + LG+F T
Sbjct: 75 KYMVNYKLGDFVPT 88
>UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 101
Score = 39.5 bits (88), Expect = 0.047
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +3
Query: 135 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 314
G K+ P LR+ EK EI+ T R I++P M+G + I+NG + I
Sbjct: 13 GEKKGPFIAKNLLRKIVMLNTMWEK-EIIVTWSRTSIVIPTMIGHTITIHNGNEHLLIYI 71
Query: 315 KPEMIGHYLGEFSVT 359
M+ H L +FS T
Sbjct: 72 TDCMVDHKLAKFSST 86
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 39.1 bits (87), Expect = 0.062
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 234 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 365
R+ I+P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 28 RDSTILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 89
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 350 ELSEVMADHLRLDFNLVKSFSVVNADN*TDHLGNDDHVSQVSLHDLWLLIRRSL--FLGA 177
++S+ +A+H LD N ++ + ++AD + D+H+++V L + W+ + +L
Sbjct: 17 DISKNVANHFWLDLNFEENVANIDADIYINKFWKDNHIAEVCLDNWWMNVCLALNSLTSL 76
Query: 176 TQLLDQ 159
QLLD+
Sbjct: 77 LQLLDK 82
>UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|Rep:
ComE operon protein 1 - Bacillus anthracis
Length = 199
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 186 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIV--GIYNGKTFNQVEIKPEMIGHYLGE 347
KE KP+I T L+ IIV +M G++V G+Y K ++V+ E G +L E
Sbjct: 43 KEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPE 98
>UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas
salina|Rep: Ribosomal protein S19 - Rhodomonas salina
(Cryptomonas salina)
Length = 72
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 201 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK-TFNQVEIKPEMIGHYLGEFSVTYK 365
N + +K RN I P +G + NG+ + +++I +M+G +GEF +T K
Sbjct: 15 NSAEKELKIISRNTTIFPSFIGKYFLVKNGENSLRKIQISVDMVGLKIGEFVITKK 70
>UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 86
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -1
Query: 209 LLIRRSLFLGATQLLDQCHWFTFKTTSEPPARTGMH*FHELLIGHIKELIEINSPVSELP 30
LL R L +L DQ + +++ EP + G+ +L+ GH ++ I+I++ ELP
Sbjct: 18 LLTRWGLTFRLAKLFDQGRGLSLQSSLEPSSSIGVTELDKLINGHAEKCIQIDTLEVELP 77
Query: 29 E 27
E
Sbjct: 78 E 78
>UniRef50_Q4CAU9 Cluster: Putative uncharacterized protein; n=1;
Crocosphaera watsonii WH 8501|Rep: Putative
uncharacterized protein - Crocosphaera watsonii
Length = 216
Score = 33.9 bits (74), Expect = 2.3
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +3
Query: 51 VDLDQLLDMPNEQLMEL-----MHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 215
++L+++L P E ++ L +K + A ++L++ K NE+
Sbjct: 112 IELEKVLAYPEEIILSLTVLLPFRECSGNSTGDSIKEEIKAFKRELKKKLKRFYHNEQKR 171
Query: 216 IVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 338
+VK L N+ I+PE VGS++ N ++ + + I M+GH+
Sbjct: 172 VVK--LENIKILPEGVGSLMCSSNQESTSTIVI---MLGHW 207
>UniRef50_Q8IB15 Cluster: Putative uncharacterized protein
MAL8P1.71; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.71 - Plasmodium
falciparum (isolate 3D7)
Length = 372
Score = 33.5 bits (73), Expect = 3.1
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 176 SRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF*PG*NQA*DDRPLPRRVLS 355
SR + R+R SLEKH HR RD + RH R+ DDR RR LS
Sbjct: 144 SRSRERNKHRSGRNRSRSLEKHRHRRRDSHRH-RHDDRRRSRSRDKYRHDDRHRSRRRLS 202
Query: 356 H 358
+
Sbjct: 203 Y 203
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.1 bits (72), Expect = 4.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 267 SIVGIYNGKT-----FNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFI 419
S+VG+ N K N ++I+ + H L F +TY V G PG G T +R I
Sbjct: 302 SLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNPGTGKTTVARII 357
>UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga
brevicollis|Rep: Ribosomal protein S19 - Monosiga
brevicollis
Length = 77
Score = 32.7 bits (71), Expect = 5.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 234 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEM--IGHYLGEFSVTYKPVKHGR 383
RN+ I PE V + I G + V+I + IGH GEF+V+ P + R
Sbjct: 21 RNITITPEDVNKNINIETGNSKKSVKINVTIKHIGHKTGEFAVSKIPAVYKR 72
>UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria
tenella|Rep: Ribosomal protein S19 - Eimeria tenella
Length = 88
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 222 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 350
KT+ + +I+P + I+ IYNGK + + I + IG L F
Sbjct: 27 KTNNNSTLILPLFLWKIIEIYNGKRYIPININKKKIGFILKNF 69
>UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S19 - Toxoplasma gondii
Length = 70
Score = 32.3 bits (70), Expect = 7.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 219 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 350
+K + + +II P ++ ++ +Y GK+F + I + IG L F
Sbjct: 26 IKLYYKYLIITPFLIWKLMEVYTGKSFITINITKDKIGRSLQYF 69
>UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces
cerevisiae YBR289w SNF5; n=1; Candida glabrata|Rep:
Similar to sp|P18480 Saccharomyces cerevisiae YBR289w
SNF5 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1030
Score = 31.9 bits (69), Expect = 9.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -1
Query: 248 DDHVSQVSLHDLWLLIRRSLFLGATQLLDQCHW 150
++H+S++ D+ + I+ + +G TQL+DQ W
Sbjct: 493 EEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEW 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,579,325
Number of Sequences: 1657284
Number of extensions: 8386989
Number of successful extensions: 21634
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 20958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21608
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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