Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0305
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    26   0.26 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.5  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 289 IYLVYFVLFYRWRKLVL-RNMRQLRYISLYFFISGKWTGCMNHLS*T 426
           IY+++F +FY+  K+VL      + Y+   F++S + +   N  + T
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYVFDLFYLSKRASDLCNEANKT 223


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 125 CLQITFSLYNIISHSTRGVREGE 57
           CL   F+LY++ S S +  RE +
Sbjct: 283 CLSYCFNLYHLASKSNQLSREAK 305


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 125 CLQITFSLYNIISHSTRGVREGE 57
           CL   F+LY++ S S +  RE +
Sbjct: 283 CLSYCFNLYHLASKSNQLSREAK 305


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 322 IDKTKQNKLNKCHLNK 275
           IDKT +N+   C L K
Sbjct: 84  IDKTHRNQCRACRLKK 99


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 322 IDKTKQNKLNKCHLNK 275
           IDKT +N+   C L K
Sbjct: 84  IDKTHRNQCRACRLKK 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,055
Number of Sequences: 336
Number of extensions: 2758
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)