Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0304
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY302441-1|AAP58362.1| 316|Homo sapiens selectin ligand interac... 71 4e-12
AL591562-1|CAC39140.1| 373|Homo sapiens hypothetical protein pr... 63 1e-09
AL008726-5|CAI20246.1| 364|Homo sapiens sorting nexin family me... 63 1e-09
AL008726-2|CAI20243.1| 373|Homo sapiens sorting nexin family me... 63 1e-09
AF523834-1|AAM77915.1| 373|Homo sapiens sorting nexin protein f... 63 1e-09
AF395845-1|AAK73126.1| 373|Homo sapiens SNX21 protein. 63 1e-09
AK095851-1|BAC04637.1| 184|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AK091359-1|BAC03646.1| 184|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AF258570-1|AAG23773.1| 184|Homo sapiens PP3993 protein. 45 3e-04
BC015326-1|AAH15326.1| 496|Homo sapiens serum/glucocorticoid re... 42 0.003
AK223523-1|BAD97243.1| 496|Homo sapiens serum/glucocorticoid re... 41 0.005
BT006631-1|AAP35277.1| 342|Homo sapiens sorting nexin 15 protein. 40 0.008
BC014520-1|AAH14520.1| 342|Homo sapiens sorting nexin 15 protein. 40 0.008
BC012767-1|AAH12767.1| 342|Homo sapiens sorting nexin 15 protein. 40 0.008
BC009897-1|AAH09897.1| 342|Homo sapiens sorting nexin 15 protein. 40 0.008
AF175268-1|AAF89956.1| 255|Homo sapiens sorting nexin 15A protein. 40 0.008
AF175267-1|AAF89955.1| 342|Homo sapiens sorting nexin 15 protein. 40 0.008
AF001435-1|AAB81205.1| 152|Homo sapiens unknown protein. 40 0.008
AB209439-1|BAD92676.1| 267|Homo sapiens sorting nexin 15 isofor... 40 0.008
BC029857-1|AAH29857.1| 282|Homo sapiens LOC92017 protein protein. 39 0.019
AK074072-1|BAB84898.1| 373|Homo sapiens FLJ00143 protein protein. 39 0.019
AF085233-1|AAF27051.2| 496|Homo sapiens SGK-like protein SGKL p... 39 0.019
AB018256-1|BAA34433.1| 945|Homo sapiens KIAA0713 protein protein. 38 0.043
BC045667-1|AAH45667.1| 957|Homo sapiens sorting nexin 13 protein. 37 0.076
AF420470-1|AAL37728.1| 957|Homo sapiens RGS-PX1 protein. 37 0.076
AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein pr... 35 0.30
BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein. 34 0.53
BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein. 34 0.53
BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein. 34 0.53
AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein. 34 0.53
AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein. 34 0.53
AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein. 34 0.53
AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform... 33 0.70
BC117220-1|AAI17221.1| 628|Homo sapiens sorting nexin associate... 32 2.1
BC117218-1|AAI17219.1| 628|Homo sapiens sorting nexin associate... 32 2.1
BC067860-1|AAH67860.1| 624|Homo sapiens SNAG1 protein protein. 32 2.1
BC060791-1|AAH60791.1| 624|Homo sapiens SNAG1 protein protein. 32 2.1
AF395536-1|AAK82415.1| 628|Homo sapiens sorting nexin 18 protein. 32 2.1
AF121862-1|AAD27835.1| 362|Homo sapiens sorting nexin 13 protein. 31 2.8
BC045534-1|AAH45534.1| 1028|Homo sapiens SWI/SNF-related, matrix... 30 6.6
BC019823-1|AAH19823.1| 199|Homo sapiens sorting nexin family me... 30 6.6
AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein. 30 6.6
AL390067-5|CAH71937.1| 437|Homo sapiens sorting nexin family me... 30 6.6
AL360235-2|CAI41353.1| 437|Homo sapiens sorting nexin family me... 30 6.6
AL139041-3|CAI95198.1| 437|Homo sapiens sorting nexin family me... 30 6.6
AL008726-3|CAI20244.1| 199|Homo sapiens sorting nexin family me... 30 6.6
AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein. 30 6.6
AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein. 30 6.6
DQ246831-1|ABB45663.1| 318|Homo sapiens NADH dehydrogenase subu... 30 8.7
BX640971-1|CAE45986.1| 1221|Homo sapiens hypothetical protein pr... 30 8.7
AK027490-1|BAB55150.1| 702|Homo sapiens protein ( Homo sapiens ... 30 8.7
AB032948-1|BAA86436.1| 1048|Homo sapiens KIAA1122 protein protein. 30 8.7
>AY302441-1|AAP58362.1| 316|Homo sapiens selectin ligand interactor
cytoplasmic-1 protein.
Length = 316
Score = 70.9 bits (166), Expect = 4e-12
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Frame = +2
Query: 2 TRVLNAYIFYY*CNKRLKMLRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANV 181
TR L Y C + L F+I S+R + + KFV Y + V +T D + A +
Sbjct: 57 TRELQQYWQNQKCRWKHVKLLFEIASARIEERKVS--KFVVYQIIVI-QTGSFDNNKAVL 113
Query: 182 ERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSR 361
ERRY+ F L L K + ++ FPRK + GNF +I R A + L L+
Sbjct: 114 ERRYSDFAKLQKALLKTFREEIEDVEFPRKHLTGNFAEEMICERRRALQEYLGLLYAIRC 173
Query: 362 LRDCPAAITFFQDVELSEAKRLINEGKFDQALSILETSFKLLNKVYTDRSRVVLCALCRI 541
+R + F EL EA + G++ +AL +L L K+ + ALC +
Sbjct: 174 VRRSREFLDFLTRPELREAFGCLRAGQYPRALELLLRVLPLQEKLTAHCPAAAVPALCAV 233
Query: 542 VACAGASDGTLAGPVERWA--QLALRRYEA 625
+ C L P E +A + AL+R +A
Sbjct: 234 LLC----HRDLDRPAEAFAAGERALQRLQA 259
>AL591562-1|CAC39140.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 62.9 bits (146), Expect = 1e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
+ +SFPRK + NF A I+ R AFE L + LR P FF EL A
Sbjct: 188 GPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRA 247
Query: 419 KRLINEGKFDQALSILETSFKL 484
+ L G + +AL++ +++L
Sbjct: 248 QSLTCTGLYREALALWANAWQL 269
>AL008726-5|CAI20246.1| 364|Homo sapiens sorting nexin family
member 21 protein.
Length = 364
Score = 62.9 bits (146), Expect = 1e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 122 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 178
Query: 239 TLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
+ +SFPRK + NF A I+ R AFE L + LR P FF EL A
Sbjct: 179 GPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRA 238
Query: 419 KRLINEGKFDQALSILETSFKL 484
+ L G + +AL++ +++L
Sbjct: 239 QSLTCTGLYREALALWANAWQL 260
>AL008726-2|CAI20243.1| 373|Homo sapiens sorting nexin family
member 21 protein.
Length = 373
Score = 62.9 bits (146), Expect = 1e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
+ +SFPRK + NF A I+ R AFE L + LR P FF EL A
Sbjct: 188 GPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRA 247
Query: 419 KRLINEGKFDQALSILETSFKL 484
+ L G + +AL++ +++L
Sbjct: 248 QSLTCTGLYREALALWANAWQL 269
>AF523834-1|AAM77915.1| 373|Homo sapiens sorting nexin protein
family member 21 protein.
Length = 373
Score = 62.9 bits (146), Expect = 1e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
+ +SFPRK + NF A I+ R AFE L + LR P FF EL A
Sbjct: 188 GPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRA 247
Query: 419 KRLINEGKFDQALSILETSFKL 484
+ L G + +AL++ +++L
Sbjct: 248 QSLTCTGLYREALALWANAWQL 269
>AF395845-1|AAK73126.1| 373|Homo sapiens SNX21 protein.
Length = 373
Score = 62.9 bits (146), Expect = 1e-09
Identities = 44/142 (30%), Positives = 69/142 (48%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
+ +SFPRK + NF A I+ R AFE L + LR P FF EL A
Sbjct: 188 GPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRA 247
Query: 419 KRLINEGKFDQALSILETSFKL 484
+ L G + +AL++ +++L
Sbjct: 248 QSLTCTGLYREALALWANAWQL 269
>AK095851-1|BAC04637.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ38532 fis, clone HCHON2001099. ).
Length = 184
Score = 44.8 bits (101), Expect = 3e-04
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +2
Query: 254 LSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEAKRLIN 433
+SFPRK + NF A I+ R AFE L + LR P FF EL A+ L
Sbjct: 4 ISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRAQSLTC 63
Query: 434 EGKFDQALSILETSFKL 484
G + +AL++ +++L
Sbjct: 64 TGLYREALALWANAWQL 80
>AK091359-1|BAC03646.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ34040 fis, clone FCBBF2005966. ).
Length = 184
Score = 44.8 bits (101), Expect = 3e-04
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +2
Query: 254 LSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEAKRLIN 433
+SFPRK + NF A I+ R AFE L + LR P FF EL A+ L
Sbjct: 4 ISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRAQSLTC 63
Query: 434 EGKFDQALSILETSFKL 484
G + +AL++ +++L
Sbjct: 64 TGLYREALALWANAWQL 80
>AF258570-1|AAG23773.1| 184|Homo sapiens PP3993 protein.
Length = 184
Score = 44.8 bits (101), Expect = 3e-04
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +2
Query: 254 LSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEAKRLIN 433
+SFPRK + NF A I+ R AFE L + LR P FF EL A+ L
Sbjct: 4 ISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRAQSLTC 63
Query: 434 EGKFDQALSILETSFKL 484
G + +AL++ +++L
Sbjct: 64 TGLYREALALWANAWQL 80
>BC015326-1|AAH15326.1| 496|Homo sapiens serum/glucocorticoid
regulated kinase family, member 3 protein.
Length = 496
Score = 41.5 bits (93), Expect = 0.003
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 101 ETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVV 280
E +K+F Y V V+ + V RRY F LYN LKK+ P + L P K +
Sbjct: 26 EKKKRFTVYKVLVS-----VGRSEWFVFRRYAEFDKLYNTLKKQFPAMA--LKIPAKRIF 78
Query: 281 G-NFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQ 397
G NFD + I R A + + L + P F Q
Sbjct: 79 GDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>AK223523-1|BAD97243.1| 496|Homo sapiens serum/glucocorticoid
regulated kinase-like isoform 1 variant protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.005
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 101 ETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVV 280
E +K+F Y V V+ + V RRY F LYN LKK+ P + L P K +
Sbjct: 26 EKKKRFTVYKVLVS-----VGRSEWFVFRRYAEFDKLYNTLKKQFPAMA--LKIPAKRIF 78
Query: 281 G-NFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQ 397
G NFD + I R A + + L + P F Q
Sbjct: 79 GDNFDPDSIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>BT006631-1|AAP35277.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>BC014520-1|AAH14520.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>BC012767-1|AAH12767.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>BC009897-1|AAH09897.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>AF175268-1|AAF89956.1| 255|Homo sapiens sorting nexin 15A protein.
Length = 255
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>AF175267-1|AAF89955.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>AF001435-1|AAB81205.1| 152|Homo sapiens unknown protein.
Length = 152
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 13 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 69
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 70 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 129
>AB209439-1|BAD92676.1| 267|Homo sapiens sorting nexin 15 isoform B
variant protein.
Length = 267
Score = 39.9 bits (89), Expect = 0.008
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 FKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTL 244
+ + RT TE K A + + D D V +RY+ F L+ L L
Sbjct: 12 YTVSDPRTHPKGYTEYKVTAQFIS---KKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNL 68
Query: 245 LNNL----SFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELS 412
L +FPR V G F+A++I R E LL + L + P FF+ E++
Sbjct: 69 FRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVT 128
>BC029857-1|AAH29857.1| 282|Homo sapiens LOC92017 protein protein.
Length = 282
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 167 DPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLM 346
D N+ RRYT F L++ L+ + P + +FP K +GN DA + R ++ L +
Sbjct: 176 DEWNIYRRYTEFRSLHHKLQNKYPQ-VRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSV 234
Query: 347 SN 352
N
Sbjct: 235 MN 236
>AK074072-1|BAB84898.1| 373|Homo sapiens FLJ00143 protein protein.
Length = 373
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 167 DPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLM 346
D N+ RRYT F L++ L+ + P + +FP K +GN DA + R ++ L +
Sbjct: 247 DEWNIYRRYTEFRSLHHKLQNKYPQ-VRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSV 305
Query: 347 SN 352
N
Sbjct: 306 MN 307
>AF085233-1|AAF27051.2| 496|Homo sapiens SGK-like protein SGKL
protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.019
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 101 ETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVV 280
E +K+F Y V V+ + V RRY LYN LKK+ P + L P K +
Sbjct: 26 EKKKRFTVYKVLVS-----VGRSEWFVFRRYAEVDKLYNTLKKQFPAMA--LKIPAKRIF 78
Query: 281 G-NFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQ 397
G NFD + I R A + + L + P F Q
Sbjct: 79 GDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>AB018256-1|BAA34433.1| 945|Homo sapiens KIAA0713 protein protein.
Length = 945
Score = 37.5 bits (83), Expect = 0.043
Identities = 22/97 (22%), Positives = 42/97 (43%)
Frame = +2
Query: 110 KKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNF 289
K + Y + V+R +L ++ RRY+ F D + + ++ +L + L P K N
Sbjct: 644 KTYALYAITVHRR-NLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPEKKTFNNM 702
Query: 290 DANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQD 400
D + + R + L L+ ++ PA + D
Sbjct: 703 DRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYD 739
>BC045667-1|AAH45667.1| 957|Homo sapiens sorting nexin 13 protein.
Length = 957
Score = 36.7 bits (81), Expect = 0.076
Identities = 22/97 (22%), Positives = 42/97 (43%)
Frame = +2
Query: 110 KKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNF 289
K + Y + V+R +L ++ RRY+ F D + + ++ +L + L P K N
Sbjct: 576 KTYALYAITVHRR-NLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPGKKTFNNM 634
Query: 290 DANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQD 400
D + + R + L L+ ++ PA + D
Sbjct: 635 DRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYD 671
>AF420470-1|AAL37728.1| 957|Homo sapiens RGS-PX1 protein.
Length = 957
Score = 36.7 bits (81), Expect = 0.076
Identities = 22/97 (22%), Positives = 42/97 (43%)
Frame = +2
Query: 110 KKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNF 289
K + Y + V+R +L ++ RRY+ F D + + ++ +L + L P K N
Sbjct: 576 KTYALYAITVHRR-NLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPGKKTFNNM 634
Query: 290 DANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQD 400
D + + R + L L+ ++ PA + D
Sbjct: 635 DRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYD 671
>AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein
protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.30
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 68 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 127
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 128 PLPEKFIVKGIVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 175
>BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 33.9 bits (74), Expect = 0.53
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform a
variant protein.
Length = 387
Score = 33.5 bits (73), Expect = 0.70
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +2
Query: 86 TVDSSE----TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLL-- 247
TVD E T + F+ Y + D V RRY FL L L++ PTL+
Sbjct: 35 TVDEPESHVTTIETFITYRIITKTTRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIP 94
Query: 248 -NNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVEL 409
F K +V F+ + I TR A L +R+ D P +TF +D ++
Sbjct: 95 PLPEKFIVKGMVERFNDDFIETRRKALHKFL------NRIADHP-TLTFNEDFKI 142
>BC117220-1|AAI17221.1| 628|Homo sapiens sorting nexin associated
golgi protein 1 protein.
Length = 628
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +2
Query: 86 TVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFP 265
T+D + KF ++ + + V RRY HF LY L ++ P +++ P
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKL-VPTHTQVPVHRRYKHFDWLYARLAEKFP-VISVPHLP 336
Query: 266 RKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDC 373
K G F+ + IS R ++ M++ L C
Sbjct: 337 EKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQC 372
>BC117218-1|AAI17219.1| 628|Homo sapiens sorting nexin associated
golgi protein 1 protein.
Length = 628
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +2
Query: 86 TVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFP 265
T+D + KF ++ + + V RRY HF LY L ++ P +++ P
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKL-VPTHTQVPVHRRYKHFDWLYARLAEKFP-VISVPHLP 336
Query: 266 RKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDC 373
K G F+ + IS R ++ M++ L C
Sbjct: 337 EKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQC 372
>BC067860-1|AAH67860.1| 624|Homo sapiens SNAG1 protein protein.
Length = 624
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +2
Query: 86 TVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFP 265
T+D + KF ++ + + V RRY HF LY L ++ P +++ P
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKL-VPTHTQVPVHRRYKHFDWLYARLAEKFP-VISVPHLP 336
Query: 266 RKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDC 373
K G F+ + IS R ++ M++ L C
Sbjct: 337 EKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQC 372
>BC060791-1|AAH60791.1| 624|Homo sapiens SNAG1 protein protein.
Length = 624
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +2
Query: 86 TVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFP 265
T+D + KF ++ + + V RRY HF LY L ++ P +++ P
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKL-VPTHTQVPVHRRYKHFDWLYARLAEKFP-VISVPHLP 336
Query: 266 RKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDC 373
K G F+ + IS R ++ M++ L C
Sbjct: 337 EKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQC 372
>AF395536-1|AAK82415.1| 628|Homo sapiens sorting nexin 18 protein.
Length = 628
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = +2
Query: 86 TVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPTLLNNLSFP 265
T+D + KF ++ + + V RRY HF LY L ++ P +++ P
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKL-VPTHTQVPVHRRYKHFDWLYARLAEKFP-VISVPHLP 336
Query: 266 RKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDC 373
K G F+ + IS R ++ M++ L C
Sbjct: 337 EKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQC 372
>AF121862-1|AAD27835.1| 362|Homo sapiens sorting nexin 13 protein.
Length = 362
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 185 RRYTHFLDLYNGLKKEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRL 364
RRY+ F D + + ++ +L + L P K N D + + R + L L+ +
Sbjct: 5 RRYSDFHDFHMRITEQFESLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLAPEMM 64
Query: 365 RDCPAAITFFQD 400
+ PA + D
Sbjct: 65 KASPALAHYVYD 76
>BC045534-1|AAH45534.1| 1028|Homo sapiens SWI/SNF-related,
matrix-associated actin-dependent regulator of
chromatin, subf protein.
Length = 1028
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 185 FQRSQDLDQPNPFLDSPVPCRLQISSRSQNYPLSVTK 75
F QD+ + S VP ++SSRSQNYP + TK
Sbjct: 292 FAEDQDMQYAS---QSEVPNGKEVSSRSQNYPKNATK 325
>BC019823-1|AAH19823.1| 199|Homo sapiens sorting nexin family
member 21 protein.
Length = 199
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLTVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPR 268
+ +SFP+
Sbjct: 188 GPMAAISFPQ 197
>AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein.
Length = 1026
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 185 FQRSQDLDQPNPFLDSPVPCRLQISSRSQNYPLSVTK 75
F QD+ + S VP ++SSRSQNYP + TK
Sbjct: 292 FAEDQDMQYAS---QSEVPNGKEVSSRSQNYPKNATK 325
>AL390067-5|CAH71937.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 104 TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPT-LLNNL--SFPRKT 274
T + ++ Y + D +V RRY F L + L++ QPT L+ L F K
Sbjct: 104 TMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKG 163
Query: 275 VVGNFDANLISTRCAAFESLL 337
VV F + TR A + L
Sbjct: 164 VVDRFSEEFVETRRKALDKFL 184
>AL360235-2|CAI41353.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 104 TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPT-LLNNL--SFPRKT 274
T + ++ Y + D +V RRY F L + L++ QPT L+ L F K
Sbjct: 104 TMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKG 163
Query: 275 VVGNFDANLISTRCAAFESLL 337
VV F + TR A + L
Sbjct: 164 VVDRFSEEFVETRRKALDKFL 184
>AL139041-3|CAI95198.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 30.3 bits (65), Expect = 6.6
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 104 TEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQPT-LLNNL--SFPRKT 274
T + ++ Y + D +V RRY F L + L++ QPT L+ L F K
Sbjct: 104 TMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKG 163
Query: 275 VVGNFDANLISTRCAAFESLL 337
VV F + TR A + L
Sbjct: 164 VVDRFSEEFVETRRKALDKFL 184
>AL008726-3|CAI20244.1| 199|Homo sapiens sorting nexin family
member 21 protein.
Length = 199
Score = 30.3 bits (65), Expect = 6.6
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 59 LRFKIISSRTVDSSETEKKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQP 238
L F++ S+ V + K+V Y + V D PA + RRY+ F L+ L+++
Sbjct: 131 LLFEVTSANVV--KDPPSKYVLYTLAVIGPGP-PDCQPAQISRRYSDFERLHRNLQRQFR 187
Query: 239 TLLNNLSFPR 268
+ +SFP+
Sbjct: 188 GPMAAISFPQ 197
>AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein.
Length = 457
Score = 30.3 bits (65), Expect = 6.6
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Frame = +2
Query: 116 FVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQ--------PTLLNNLSFPRK 271
+VAY V L V+RR++ FL LY L ++ P+ +L K
Sbjct: 97 YVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPSPEKSLIGMTK 156
Query: 272 TVVGNFD---ANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
VG D A + R AA E L + N + P F + EL A
Sbjct: 157 VKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA 208
>AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 30.3 bits (65), Expect = 6.6
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Frame = +2
Query: 116 FVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLKKEQ--------PTLLNNLSFPRK 271
+VAY V L V+RR++ FL LY L ++ P+ +L K
Sbjct: 162 YVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPSPEKSLIGMTK 221
Query: 272 TVVGNFD---ANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSEA 418
VG D A + R AA E L + N + P F + EL A
Sbjct: 222 VKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA 273
>DQ246831-1|ABB45663.1| 318|Homo sapiens NADH dehydrogenase subunit
1 protein.
Length = 318
Score = 29.9 bits (64), Expect = 8.7
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Frame = -1
Query: 489 FNNLKLVSSMDSAWSNLPS-------LISLLASLNSTSWKNVIAAGQSRSLESLLIKSNS 331
FN L+++ + W LPS IS LA N T + +A G+S + I+ +
Sbjct: 160 FNLSTLITTQEHLWLLLPSWPLAMMWFISTLAETNRTPFD--LAEGESELVSGFNIEYAA 217
Query: 330 DSNA----AQRVDIKLASKLPTTVFLG 262
A A+ DI + + L TT+FLG
Sbjct: 218 GPFALFFMAEYTDIIMMNTLTTTIFLG 244
>BX640971-1|CAE45986.1| 1221|Homo sapiens hypothetical protein
protein.
Length = 1221
Score = 29.9 bits (64), Expect = 8.7
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Frame = -1
Query: 642 KSESLTASYLRNASCAHRSTGPANVPSLAPAHATIRQRAQST--TLDLSV*TLFNNLKLV 469
K + A+ + N + ++ AN+ ++ I + +S TL ++ +F+N+
Sbjct: 582 KEANEVANQILNLTADGQNLTSANITNIVEQVKRIVNKEESIDITLGSTLMNIFSNILSS 641
Query: 468 SSMDSAWSNLPSL-----ISLLASLNSTSWKNVIAAGQSRSLESLLIKSNSDSN 322
S D S+ +L ++ LNSTS N+ + S+ SLL +N+ SN
Sbjct: 642 SDSDLLESSSEALKTIDELAFKIDLNSTSHVNITTRNLALSVSSLLPGTNAISN 695
>AK027490-1|BAB55150.1| 702|Homo sapiens protein ( Homo sapiens
cDNA FLJ14584 fis, clone NT2RM4001592. ).
Length = 702
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 185 FQRSQDLDQPNPFLDSPVPCRLQISSRSQNYPLSVTK 75
F QD+ + S VP ++SSRSQNYP + TK
Sbjct: 292 FAEDQDMQYVS---QSEVPNGKEVSSRSQNYPKNATK 325
>AB032948-1|BAA86436.1| 1048|Homo sapiens KIAA1122 protein protein.
Length = 1048
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 185 FQRSQDLDQPNPFLDSPVPCRLQISSRSQNYPLSVTK 75
F QD+ + S VP ++SSRSQNYP + TK
Sbjct: 312 FAEDQDMQYVS---QSEVPNGKEVSSRSQNYPKNATK 345
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,581,304
Number of Sequences: 237096
Number of extensions: 2291604
Number of successful extensions: 7839
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 7721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7837
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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