Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0304
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061149-1|AAL28697.1|  326|Drosophila melanogaster LD12265p pro...   166   3e-41
AE014134-463|AAF51213.2|  326|Drosophila melanogaster CG3077-PA ...   166   3e-41
AY128436-1|AAM75029.1|  927|Drosophila melanogaster LD08259p pro...    31   1.9  
AE013599-1176|AAM68750.1|  927|Drosophila melanogaster CG12342-P...    31   1.9  
AE013599-1175|AAF58749.2|  927|Drosophila melanogaster CG12342-P...    31   1.9  
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    29   4.4  

>AY061149-1|AAL28697.1|  326|Drosophila melanogaster LD12265p
           protein.
          Length = 326

 Score =  166 bits (403), Expect = 3e-41
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
 Frame = +2

Query: 56  MLRFKIISSRTV--DSSETE-KKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLK 226
           +LRF I+ +  +  D  + + K+FV Y + V ++    D  PA +ERRYT F +LY GLK
Sbjct: 70  VLRFDILLAHIMPPDGEDVKIKRFVVYELTVKQDGATEDTQPAKIERRYTDFRELYLGLK 129

Query: 227 KEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVE 406
           ++ P  + N  FP K ++GNF + LI  R AAFE+ L  +++ + LRD    + F Q  E
Sbjct: 130 RQHPAEMANKYFPAKVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQHDE 189

Query: 407 LSEAKRLINEGKFDQALSILETSFKLLNKVYTDRSRVVLCALCRIVACAGASDGTLAGPV 586
           L+ A + ++E + + A+ ILE  F+LLNK+Y +RSR VL  LCR+VA A  S        
Sbjct: 190 LTRACQFLDERRNEMAIPILENCFRLLNKIYMNRSRPVLLILCRLVA-ACTSSPVPHHAA 248

Query: 587 ERWAQLALRRYEAVSDSDLLLIYIPLLH 670
           ERWA LAL R+E + D DLL +YIPLLH
Sbjct: 249 ERWALLALSRFETLCDIDLLPLYIPLLH 276


>AE014134-463|AAF51213.2|  326|Drosophila melanogaster CG3077-PA
           protein.
          Length = 326

 Score =  166 bits (403), Expect = 3e-41
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
 Frame = +2

Query: 56  MLRFKIISSRTV--DSSETE-KKFVAYMVQVNRETDLADQDPANVERRYTHFLDLYNGLK 226
           +LRF I+ +  +  D  + + K+FV Y + V ++    D  PA +ERRYT F +LY GLK
Sbjct: 70  VLRFDILLAHIMPPDGEDVKIKRFVVYELTVKQDGATEDTQPAKIERRYTDFRELYLGLK 129

Query: 227 KEQPTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVE 406
           ++ P  + N  FP K ++GNF + LI  R AAFE+ L  +++ + LRD    + F Q  E
Sbjct: 130 RQHPAEMANKYFPAKVLMGNFKSELIGERSAAFEAFLTYVASQAMLRDSEYFLRFLQHDE 189

Query: 407 LSEAKRLINEGKFDQALSILETSFKLLNKVYTDRSRVVLCALCRIVACAGASDGTLAGPV 586
           L+ A + ++E + + A+ ILE  F+LLNK+Y +RSR VL  LCR+VA A  S        
Sbjct: 190 LTRACQFLDERRNEMAIPILENCFRLLNKIYMNRSRPVLLILCRLVA-ACTSSPVPHHAA 248

Query: 587 ERWAQLALRRYEAVSDSDLLLIYIPLLH 670
           ERWA LAL R+E + D DLL +YIPLLH
Sbjct: 249 ERWALLALSRFETLCDIDLLPLYIPLLH 276


>AY128436-1|AAM75029.1|  927|Drosophila melanogaster LD08259p
           protein.
          Length = 927

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -1

Query: 441 LPSLISLLASLNSTSWKNVIAAGQSRSLESLLIKSNSDSNAAQRV 307
           LP+ IS   S N TS    +AAG  R +E LL  SN+D  A + V
Sbjct: 14  LPNAISGPDSSNWTSLHEAVAAGDDRRVEGLLF-SNADRLARESV 57


>AE013599-1176|AAM68750.1|  927|Drosophila melanogaster CG12342-PB,
           isoform B protein.
          Length = 927

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -1

Query: 441 LPSLISLLASLNSTSWKNVIAAGQSRSLESLLIKSNSDSNAAQRV 307
           LP+ IS   S N TS    +AAG  R +E LL  SN+D  A + V
Sbjct: 14  LPNAISGPDSSNWTSLHEAVAAGDDRRVEGLLF-SNADRLARESV 57


>AE013599-1175|AAF58749.2|  927|Drosophila melanogaster CG12342-PA,
           isoform A protein.
          Length = 927

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -1

Query: 441 LPSLISLLASLNSTSWKNVIAAGQSRSLESLLIKSNSDSNAAQRV 307
           LP+ IS   S N TS    +AAG  R +E LL  SN+D  A + V
Sbjct: 14  LPNAISGPDSSNWTSLHEAVAAGDDRRVEGLLF-SNADRLARESV 57


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/79 (20%), Positives = 35/79 (44%)
 Frame = +2

Query: 236 PTLLNNLSFPRKTVVGNFDANLISTRCAAFESLLDLMSNDSRLRDCPAAITFFQDVELSE 415
           P   + +  PR  ++ N +  L+    AAF+ L  ++       D  ++ ++ ++  +  
Sbjct: 595 PLSSDRIELPRAALIDNSEGGLVRIVFAAFDRLESILKPSYDHFDLKSSRSYVRNTAILS 654

Query: 416 AKRLINEGKFDQALSILET 472
               +N G+  Q L IL +
Sbjct: 655 NDSDVNAGEIQQRLRILNS 673


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,055,103
Number of Sequences: 53049
Number of extensions: 674403
Number of successful extensions: 1644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)