Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0303
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   6.5  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   8.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   8.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.6  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 558 IYPHGSVDKLPYATMGSGSLAA 623
           I P  S   LP+A++GSG  ++
Sbjct: 8   ISPSSSSSSLPFASLGSGKTSS 29


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 440 CTCRNCCHTAETNAI 484
           C C  CC TAE   +
Sbjct: 65  CQCEKCCLTAERQRV 79


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 440 CTCRNCCHTAETNAI 484
           C C  CC TAE   +
Sbjct: 65  CQCEKCCLTAERQRV 79


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 423 LHTGRTVPVETAATLLKRML 482
           LHTGR   V+  AT LK ++
Sbjct: 516 LHTGRNAMVKEFATKLKHLV 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,454
Number of Sequences: 2352
Number of extensions: 13219
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)