Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0302
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.55 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 106 FPSPLGIPHLNNKIEP 153
           FPSP G P ++N I P
Sbjct: 237 FPSPGGFPSIHNSINP 252


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 363 NYVDLSFRSGFFMIEGLLVAQQ 298
           N +   FRSGFF + G+ + ++
Sbjct: 354 NIISSKFRSGFFKLCGMKIVKK 375


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 556 GGAAVVTILEILELISQGGWR 618
           G A ++   EI+EL  +GGW+
Sbjct: 292 GEAGMLGYNEIVELQKEGGWK 312


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 654 WLLEPIDIHNVXAPSTLRYK 595
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 258 SLCSPTCPGETGKAAGPPVILQS*KNQIEKTNRHN 362
           SL   T  G+ GK+   PVI    +N++ + ++ N
Sbjct: 204 SLSPDTVFGDDGKSEDVPVISLKNENELPQQHKTN 238


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 371 TEVIMSICLFDLVFL*LKDYWWPSSLSSFTRT 276
           T+ ++ I  F+L +L    YW    ++ F+RT
Sbjct: 310 TDTLVVIYTFNLFYLCFCFYWLLVMVAMFSRT 341


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 371 TEVIMSICLFDLVFL*LKDYWWPSSLSSFTRT 276
           T+ ++ I  F+L +L    YW    ++ F+RT
Sbjct: 266 TDTLVVIYTFNLFYLCFCFYWLLVMVAMFSRT 297


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 315 ILQS*KNQIEKTNRHNYFSTPRKAPVTYTAVKW 413
           +LQS     EKT    Y +     P+TY    W
Sbjct: 20  VLQSYNFLQEKTTYEYYENNQALPPITYPPSDW 52


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 315 ILQS*KNQIEKTNRHNYFSTPRKAPVTYTAVKW 413
           +LQS     EKT    Y +     P+TY    W
Sbjct: 11  VLQSYNFLQEKTTYEYYENNQALPPITYPPSDW 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,354
Number of Sequences: 336
Number of extensions: 3480
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)