Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0302
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   3.7  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   8.5  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   8.5  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 540  HYCFTAEIGRVMVSTRADSQEVLP 469
            H  F AEIG  +V    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 183 PAEKLSGLMHGFDLVIKVRNT*WTGKDESISTG 85
           P E+  GLM+G +   K   T WTG D+    G
Sbjct: 120 PCEEF-GLMYGKNSTSKDTVTVWTGVDDITQYG 151


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 88  GGNRFVFPSPLGIPHLNNKIEP 153
           GGNR       GI  L N IEP
Sbjct: 330 GGNRIPLDEQTGIDVLGNIIEP 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,604
Number of Sequences: 2352
Number of extensions: 13478
Number of successful extensions: 62
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)