Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0302
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069573-1|AAL39718.1|  832|Drosophila melanogaster LD31161p pro...    29   7.3  
AE014297-4291|AAN14305.1|  832|Drosophila melanogaster CG33553-P...    29   7.3  
AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P...    29   7.3  
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P...    29   7.3  
AY128505-1|AAM75098.1| 1533|Drosophila melanogaster SD07147p pro...    28   9.7  
AE014297-1403|AAF54717.4| 1975|Drosophila melanogaster CG6977-PA...    28   9.7  

>AY069573-1|AAL39718.1|  832|Drosophila melanogaster LD31161p
           protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 553 SNRNALLLHGRNRQGDGIHPRGLTRGPTTSNSLRKLKYI 437
           SN NA++ H     G+   P+    GPT+S+S    KYI
Sbjct: 50  SNNNAIMSHSLT--GEHKDPKTALEGPTSSSSSSSSKYI 86


>AE014297-4291|AAN14305.1|  832|Drosophila melanogaster CG33553-PC,
           isoform C protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 553 SNRNALLLHGRNRQGDGIHPRGLTRGPTTSNSLRKLKYI 437
           SN NA++ H     G+   P+    GPT+S+S    KYI
Sbjct: 50  SNNNAIMSHSLT--GEHKDPKTALEGPTSSSSSSSSKYI 86


>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
            isoform H protein.
          Length = 1704

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 553  SNRNALLLHGRNRQGDGIHPRGLTRGPTTSNSLRKLKYI 437
            SN NA++ H     G+   P+    GPT+S+S    KYI
Sbjct: 1263 SNNNAIMSHSLT--GEHKDPKTALEGPTSSSSSSSSKYI 1299


>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
            isoform D protein.
          Length = 2063

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 553  SNRNALLLHGRNRQGDGIHPRGLTRGPTTSNSLRKLKYI 437
            SN NA++ H     G+   P+    GPT+S+S    KYI
Sbjct: 1281 SNNNAIMSHSLT--GEHKDPKTALEGPTSSSSSSSSKYI 1317


>AY128505-1|AAM75098.1| 1533|Drosophila melanogaster SD07147p
           protein.
          Length = 1533

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 183 PAEKLSGLMHGFDLVIKVRNT*WTGKDESISTGDLRVSQ--RVKFFFLIPA 37
           PA+ LSG    ++L I  R+T  +G  ES +   + V +  R K  F+IPA
Sbjct: 830 PAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEFVIPA 880


>AE014297-1403|AAF54717.4| 1975|Drosophila melanogaster CG6977-PA
            protein.
          Length = 1975

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 183  PAEKLSGLMHGFDLVIKVRNT*WTGKDESISTGDLRVSQ--RVKFFFLIPA 37
            PA+ LSG    ++L I  R+T  +G  ES +   + V +  R K  F+IPA
Sbjct: 1272 PAQSLSGKHGAYELTISARDTQGSGTMESTTKAIITVLRVNRHKPEFVIPA 1322


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,953,042
Number of Sequences: 53049
Number of extensions: 672471
Number of successful extensions: 1405
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)