Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0299
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_04_0010 - 7487455-7489490,7489569-7489980 44 1e-04
04_01_0187 - 2153546-2154520,2154581-2155858 42 3e-04
03_02_1029 - 13488535-13493037 42 4e-04
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 42 5e-04
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 42 5e-04
09_02_0555 - 10588685-10592038 41 7e-04
08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 40 0.001
07_01_1086 - 9930311-9931993 40 0.001
05_03_0216 + 10370531-10371922,10378656-10378808 40 0.002
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 40 0.002
08_01_0775 - 7531397-7531564,7531590-7532771 39 0.003
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 39 0.003
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 39 0.003
07_01_1081 + 9831606-9832499 39 0.003
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 38 0.005
04_01_0192 - 2245794-2246186,2246699-2247490 37 0.014
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 34 0.100
12_02_1209 - 27019724-27020040,27020690-27020945 28 5.0
07_01_1097 - 10068431-10068655,10068797-10068880,10068945-100692... 28 6.6
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 27 8.7
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 27 8.7
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 447 NNIQYPTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
N + P E+K+ IL++ H+S + HPG +M +KE YWW +M+++I
Sbjct: 416 NRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREI 465
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P ++K IL++ HD+ + HPG +M +KE +WW NM+++I
Sbjct: 377 PDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWANMKREI 421
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P E+K+ IL++ H+S + HPG +M +KE YWW +M+++I
Sbjct: 1061 PDSRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREI 1105
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 447 NNIQYPTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
N + P E K+ IL+ H+S + HPG +M +KE YWW +M+++I
Sbjct: 723 NRVCVPDNKEFKQLILQGAHESPYSIHPGSTKMYLDMKEKYWWVSMKREI 772
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 411 FHDTQIKVNIYHNNIQYPTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQ 587
FH+ + + P E+K IL + H + + HPG +M +KE +WW NMR+
Sbjct: 81 FHEDEHGTIWLGERLCVPDDKELKDVILTEAHQTQYSIHPGSTKMYQDLKEKFWWVNMRR 140
Query: 588 DI 593
+I
Sbjct: 141 EI 142
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 447 NNIQYPTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
N + P E+K+ IL++ H+S + H G +M +KE YWW +M+++I
Sbjct: 673 NRVCVPDNRELKQLILQEAHESPYSIHSGSTKMYLNLKEKYWWVSMKREI 722
>08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417
Length = 447
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P ++K IL++ HD+ + HPG +M +KE +WW +M+++I
Sbjct: 107 PDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREI 151
>07_01_1086 - 9930311-9931993
Length = 560
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P ++K IL++ HD+ + HPG +M +KE +WW +M+++I
Sbjct: 121 PDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREI 165
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P ++K IL++ HD+ + HPG +M +KE +WW +M+++I
Sbjct: 107 PDNKDLKDAILKEAHDTLYSIHPGSIKMYQDLKERFWWASMKREI 151
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 486 ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
IL++ H+S + HPG +M +KE YWW +M+++I
Sbjct: 268 ILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREI 303
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 447 NNIQYPTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKN 578
N + P E+K+ IL++ H+S + HPG +M +KE YWW +
Sbjct: 352 NRVCVPDDRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWSS 396
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P E+K I+++ H++ + HPG +M +K+ +WW +MR++I
Sbjct: 1338 PDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREI 1382
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P E+K I+++ H++ + HPG +M +K+ +WW +MR++I
Sbjct: 393 PDNKELKHTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREI 437
>07_01_1081 + 9831606-9832499
Length = 297
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P E+K I+++ H++ + HPG +M +K+ +WW +MR++I
Sbjct: 26 PDNKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREI 70
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P E+K IL + H + + HPG +M +KE +WW +MR++I
Sbjct: 184 PENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWISMRREI 228
>04_01_0192 - 2245794-2246186,2246699-2247490
Length = 394
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 441 YHNNIQYPTPSEIKKIL-RDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDIEN 599
Y I + I+ IL +D+H S H G+ RIK L++W +++ +EN
Sbjct: 132 YKGRIYVGDSNSIRTILLQDYHSSAFGRHLGIRATYQRIKGLFYWPGLKKKVEN 185
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 33.9 bits (74), Expect = 0.100
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 PTPSEIKK-ILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
P ++K IL+ HD+ + HPG +M +KE +W +M+++I
Sbjct: 1000 PDNKDLKDAILKKAHDTLYSIHPGSTKMYQDLKERFWCASMKREI 1044
>12_02_1209 - 27019724-27020040,27020690-27020945
Length = 190
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +3
Query: 213 HLFTHLFVRVHFYDEFTYKDIFNVLRCYRDM-----ITTWYSEEKECAISDFSDPYTK 371
H+F + ++ + YKD+ + R RD + +WY +++ D DP T+
Sbjct: 127 HIFKFNAKTTYCWNNYLYKDVKELARAKRDRDLGLPVDSWYLQKELGQFDDGGDPLTQ 184
>07_01_1097 -
10068431-10068655,10068797-10068880,10068945-10069292,
10069477-10069510,10069617-10070230,10079179-10079553,
10079599-10079853,10079983-10080300
Length = 750
Score = 27.9 bits (59), Expect = 6.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 552 IKELYWWKNMRQDI 593
+KE YWW NM++D+
Sbjct: 5 LKEGYWWPNMKRDV 18
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 111 VPYCSEIIEMSTTMPDIREVERELYSF 191
+P C+ +++MST D+ +EREL +F
Sbjct: 532 IPACNAVVDMSTNSRDL--IERELSAF 556
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 109 LYHIVQKS*KCPQLCLTYVKWRENCT 186
LY I+ +S CP L Y++ RE CT
Sbjct: 454 LYTIIHRSPICPPRHLQYIQLREICT 479
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,693,829
Number of Sequences: 37544
Number of extensions: 287473
Number of successful extensions: 651
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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