Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0299
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein. 40 0.009
AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens ... 38 0.027
BC034495-1|AAH34495.2| 870|Homo sapiens radial spoke head 10 ho... 31 3.1
BC009472-1|AAH09472.1| 544|Homo sapiens debranching enzyme homo... 30 7.1
AF180919-1|AAD53327.2| 544|Homo sapiens RNA lariat debranching ... 30 7.1
M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein. 29 9.4
BC060815-1|AAH60815.1| 1186|Homo sapiens AGTPBP1 protein protein. 29 9.4
BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated memb... 29 9.4
BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated memb... 29 9.4
BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated memb... 29 9.4
AL451131-2|CAH72318.1| 1226|Homo sapiens ATP/GTP binding protein... 29 9.4
AL451131-1|CAH72317.1| 1186|Homo sapiens ATP/GTP binding protein... 29 9.4
AL157882-3|CAH71213.1| 1226|Homo sapiens ATP/GTP binding protein... 29 9.4
AL157882-2|CAH71214.1| 1186|Homo sapiens ATP/GTP binding protein... 29 9.4
AK023280-1|BAB14505.1| 806|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK022562-1|BAB14100.1| 806|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK001544-1|BAA91749.1| 1186|Homo sapiens protein ( Homo sapiens ... 29 9.4
AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated memb... 29 9.4
AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein. 29 9.4
AB028958-1|BAA82987.2| 1220|Homo sapiens KIAA1035 protein protein. 29 9.4
>BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein.
Length = 222
Score = 39.5 bits (88), Expect = 0.009
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 447 NNIQYPTPSEIKKILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDIE 596
N + + E KK+LR+ H++ + H G++R L ++ Y+W ++ D++
Sbjct: 60 NRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVK 109
>AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ20125 fis, clone COL06152. ).
Length = 392
Score = 37.9 bits (84), Expect = 0.027
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 447 NNIQYPTPSEIKKILRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQD 590
N + + E KK+LR+ H++ + H G++R L ++ Y+W ++ D
Sbjct: 60 NRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTND 107
>BC034495-1|AAH34495.2| 870|Homo sapiens radial spoke head 10
homolog B (Chlamydomonas) protein.
Length = 870
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +3
Query: 174 RELYSFYSTGNASHLF--THLFVRVHFYDEFTYKDIFNVLRCYRDMITTWYSEEKECAIS 347
R +YSFYS+ H T L ++HF+ F F+ + + S + +
Sbjct: 421 RRIYSFYSSLGCGHSLDNTFLMTKLHFW-RFLKDCKFHHHKLTLADMDRILSANNDIPVE 479
Query: 348 DFSDPYTKLSFTKIYNIVAFLFHDTQIKVNIYHNNIQYPTPS 473
+ P+T + N +L H + +IYH Q +PS
Sbjct: 480 EIHSPFTTILLRTFLN---YLLH---LAYHIYHEEFQKRSPS 515
>BC009472-1|AAH09472.1| 544|Homo sapiens debranching enzyme homolog
1 (S. cerevisiae) protein.
Length = 544
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +3
Query: 405 FLFHDTQIKVNIYHNNIQYPTPSEIKKILRDHHDSTTAGHPGVARMLGRIKELYWW 572
FL HD + Y N Q + K R ++ T G P + +L +K YW+
Sbjct: 171 FLSHDWPRSIYHYGNKKQL---LKTKSFFRQEVENNTLGSPAASELLEHLKPTYWF 223
>AF180919-1|AAD53327.2| 544|Homo sapiens RNA lariat debranching
enzyme protein.
Length = 544
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +3
Query: 405 FLFHDTQIKVNIYHNNIQYPTPSEIKKILRDHHDSTTAGHPGVARMLGRIKELYWW 572
FL HD + Y N Q + K R ++ T G P + +L +K YW+
Sbjct: 171 FLSHDWPRSIYHYGNKKQL---LKTKSFFRQEVENNTLGSPAASELLEHLKPTYWF 223
>M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>BC060815-1|AAH60815.1| 1186|Homo sapiens AGTPBP1 protein protein.
Length = 1186
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1110 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1158
>BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>AL451131-2|CAH72318.1| 1226|Homo sapiens ATP/GTP binding protein 1
protein.
Length = 1226
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1150 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1198
>AL451131-1|CAH72317.1| 1186|Homo sapiens ATP/GTP binding protein 1
protein.
Length = 1186
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1110 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1158
>AL157882-3|CAH71213.1| 1226|Homo sapiens ATP/GTP binding protein 1
protein.
Length = 1226
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1150 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1198
>AL157882-2|CAH71214.1| 1186|Homo sapiens ATP/GTP binding protein 1
protein.
Length = 1186
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1110 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1158
>AK023280-1|BAB14505.1| 806|Homo sapiens protein ( Homo sapiens
cDNA FLJ13218 fis, clone NT2RP4001841. ).
Length = 806
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 730 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 778
>AK022562-1|BAB14100.1| 806|Homo sapiens protein ( Homo sapiens
cDNA FLJ12500 fis, clone NT2RM2001675. ).
Length = 806
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 730 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 778
>AK001544-1|BAA91749.1| 1186|Homo sapiens protein ( Homo sapiens cDNA
FLJ10682 fis, clone NT2RP3000072. ).
Length = 1186
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1110 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1158
>AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated
membrane protein 2 protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 489 LRDHHDSTTAGHPGVARMLGRIKELYWWKNMRQDI 593
L D D+ AG ++K YWWKN++ I
Sbjct: 63 LDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 97
>AB028958-1|BAA82987.2| 1220|Homo sapiens KIAA1035 protein protein.
Length = 1220
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 24 TNIQEFNDSLLKAKCKLIAYPTSIDLDESVPYCSEIIEMSTTMPDIREVE 173
+++ +F + L+++ CK+ + PT+ LDE P E ++ S D ++E
Sbjct: 1144 SSLLDFENDLIESSCKVTS-PTTYVLDEDEPRFLEEVDYSAESNDELDIE 1192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,877,204
Number of Sequences: 237096
Number of extensions: 1728767
Number of successful extensions: 6422
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6411
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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