Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0298
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 671 IFIFKVLFETKFNMYGGDNELDLLQ 597
           I+ F  +    FNM   D+E D++Q
Sbjct: 208 IYAFATIDPHNFNMISNDDESDIIQ 232


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 219 PVNCWACSSNVNPLCNDPFNIRIDTGNS 302
           P N   C  +  PLCND  N  +  G S
Sbjct: 144 PENVDGCQKH--PLCNDDPNGNVPLGKS 169


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +3

Query: 315 LENCDKNAGATFPYLTASKSVCKKEKKYIDGELVVSRGCT 434
           LE C       FP +        ++ K   G+  V  GCT
Sbjct: 48  LERCLMETLRMFPPVPIIARQLNQDLKLASGDYTVPAGCT 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,850
Number of Sequences: 336
Number of extensions: 2994
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)