Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0298
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein. 32 1.7
AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein. 32 1.7
AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein. 32 1.7
AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein. 32 1.7
AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein. 32 1.7
AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein. 32 1.7
AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein. 32 1.7
AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin prec... 32 1.7
AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin prec... 32 1.7
AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein. 32 1.7
>BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin
precursor protein.
Length = 1429
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin
precursor protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein.
Length = 1272
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 225 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 335
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,170,526
Number of Sequences: 237096
Number of extensions: 1701259
Number of successful extensions: 3636
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3636
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -