Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0293
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TFC3 Cluster: Putative uncharacterized protein; n=1; ...    38   0.33 
UniRef50_A0AG91 Cluster: Complete genome; n=1; Listeria welshime...    33   5.3  
UniRef50_Q7RF46 Cluster: Putative uncharacterized protein PY0486...    33   5.3  

>UniRef50_A7TFC3 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 474

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 167 NEQVYCEKYYKPHVTSYVPAIYTLPHYGYGNMINNYPENNIYFNKKQEKPANGYFKQW 340
           N  V  + +YKP++++   +   L  Y   N + N    NI  NKK+   +  +F +W
Sbjct: 331 NTDVKADDFYKPNLSNSTTSKDILSMYSIKNDVQNSNRGNIINNKKESNSSTSFFNKW 388


>UniRef50_A0AG91 Cluster: Complete genome; n=1; Listeria welshimeri
           serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
           welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
           /SLCC5334)
          Length = 302

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +2

Query: 161 QGNEQVYCEKYYKPHVTSYVPAIYTLPHYGYGNMINNYPENNIYFNKKQEKPANGYFK 334
           Q   Q+Y E Y K +  + V     L  YG   M   Y   N++FNK+  K AN   K
Sbjct: 138 QDGTQIYTEIYTKYYEETPVWVALELMSYGSFTMFVEYYYANVFFNKENFKMANELLK 195


>UniRef50_Q7RF46 Cluster: Putative uncharacterized protein PY04864;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04864 - Plasmodium yoelii yoelii
          Length = 1123

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 194 YKPHVTSYVPAIYTLPHYGYGNMINNYPENNIYFN 298
           Y+    SY+  I  +PH   GN INNY  NNI  N
Sbjct: 324 YRDECISYLNKIKDIPH-NIGNQINNYQNNNIIDN 357


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,247,080
Number of Sequences: 1657284
Number of extensions: 11278448
Number of successful extensions: 23359
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23340
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)