Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0292
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;...   105   1e-21
UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p...   103   4e-21
UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4; Endopterygota|...   101   2e-20
UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella ve...    86   8e-16
UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3; Caeno...    55   2e-06
UniRef50_Q08Q92 Cluster: Glycosyl hydrolases family 16; n=2; Sti...    34   3.3  
UniRef50_Q4RQ74 Cluster: Chromosome 17 SCAF15006, whole genome s...    34   4.3  

>UniRef50_Q9P055 Cluster: JNK1-associated membrane protein; n=35;
           Coelomata|Rep: JNK1-associated membrane protein - Homo
           sapiens (Human)
          Length = 326

 Score =  105 bits (252), Expect = 1e-21
 Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = +2

Query: 215 LFHYRMAAVRSCPGLYCGRIEL-EDGS---WSDCGACPRGFRTNASSYCMPCVDEPSLYD 382
           L    + A   C GLYCG+  L ++GS   + +CG CPRG RTNA  YC PC + P LYD
Sbjct: 13  LLEKNLQAAHGCLGLYCGKTLLFKNGSTEIYGECGVCPRGQRTNAQKYCQPCTESPELYD 72

Query: 383 WQYLGFMVLLPMVLHWFFIDMVTRGKA 463
           W YLGFM +LP+VLHWFFI+  +  K+
Sbjct: 73  WLYLGFMAMLPLVLHWFFIEWYSGKKS 99


>UniRef50_Q8SXK7 Cluster: RE11615p; n=2; Sophophora|Rep: RE11615p -
           Drosophila melanogaster (Fruit fly)
          Length = 304

 Score =  103 bits (248), Expect = 4e-21
 Identities = 42/70 (60%), Positives = 48/70 (68%)
 Frame = +2

Query: 236 AVRSCPGLYCGRIELEDGSWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLP 415
           A+  CPG YCGR  L + SWS CG CPRG R N S  C PC DE S Y W YLGFM +LP
Sbjct: 6   ALERCPGAYCGRSPLGNNSWSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLP 65

Query: 416 MVLHWFFIDM 445
           +++H FFIDM
Sbjct: 66  LMMHCFFIDM 75


>UniRef50_Q7PXL1 Cluster: ENSANGP00000009664; n=4;
           Endopterygota|Rep: ENSANGP00000009664 - Anopheles
           gambiae str. PEST
          Length = 298

 Score =  101 bits (242), Expect = 2e-20
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +2

Query: 230 MAAVRSCPGLYCGRIELEDGSWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVL 409
           + +V  CPGLYCGR  LE+ S S+CGAC RG+R NA   C PC  + + +DW YLGFM +
Sbjct: 3   LRSVDKCPGLYCGRTVLENSSLSECGACLRGYRVNAQYVCSPCEKDLTSHDWLYLGFMTI 62

Query: 410 LPMVLHWFFIDM 445
           LP+++HWF ID+
Sbjct: 63  LPLIIHWFCIDL 74


>UniRef50_A7RVN2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 306

 Score = 86.2 bits (204), Expect = 8e-16
 Identities = 34/73 (46%), Positives = 46/73 (63%)
 Frame = +2

Query: 224 YRMAAVRSCPGLYCGRIELEDGSWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFM 403
           Y    +  CPG YCGR++  +G +  C ACPRG+R+     C+ C     L+DW YLGF+
Sbjct: 7   YLSVELEKCPGQYCGRVQDRNGKFGKCQACPRGYRSYGD-LCVKCTKSLRLHDWLYLGFI 65

Query: 404 VLLPMVLHWFFID 442
           +L  +VLHWFFID
Sbjct: 66  ILTVIVLHWFFID 78


>UniRef50_Q9BMT9 Cluster: Seven transmembrane protein; n=3;
           Caenorhabditis|Rep: Seven transmembrane protein -
           Caenorhabditis elegans
          Length = 326

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 29/50 (58%)
 Frame = +2

Query: 290 SWSDCGACPRGFRTNASSYCMPCVDEPSLYDWQYLGFMVLLPMVLHWFFI 439
           S S CG C  G+R NA S C  C      YDW YL F+ LLP++LH  FI
Sbjct: 43  SLSRCGPCSFGYRNNAMSICESCDTPLQPYDWMYLLFIALLPLLLHMQFI 92


>UniRef50_Q08Q92 Cluster: Glycosyl hydrolases family 16; n=2;
           Stigmatella aurantiaca DW4/3-1|Rep: Glycosyl hydrolases
           family 16 - Stigmatella aurantiaca DW4/3-1
          Length = 844

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/43 (41%), Positives = 18/43 (41%)
 Frame = +2

Query: 245 SCPGLYCGRIELEDGSWSDCGACPRGFRTNASSYCMPCVDEPS 373
           SC G  CG     DG    CG C  G   NAS  C P    PS
Sbjct: 647 SCSGKTCG----SDGCGGTCGTCSTGNTCNASGQCTPNTCTPS 685


>UniRef50_Q4RQ74 Cluster: Chromosome 17 SCAF15006, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
           SCAF15006, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1034

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 284 DGSWSDCGACPRGFRTNASS 343
           DGSW DCG CP GFR N ++
Sbjct: 417 DGSW-DCGPCPAGFRGNGTN 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,415,483
Number of Sequences: 1657284
Number of extensions: 12433526
Number of successful extensions: 25682
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25678
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)