Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0291
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 39 0.002
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.087
10_08_0707 + 20037301-20037633,20037862-20038248 32 0.20
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 30 0.62
03_01_0249 - 1935355-1935827,1936129-1936330 28 3.3
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 28 3.3
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 27 4.3
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 4.3
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 27 4.3
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 27 4.3
04_03_1033 + 21861826-21863046,21863153-21863380,21863474-218637... 27 5.7
07_03_0313 + 16620817-16621515 27 7.6
06_03_0400 - 20420257-20421837 27 7.6
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 7.6
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 27 7.6
01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294 27 7.6
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = -1
Query: 385 QGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPINEKE-YPKITSW 209
+ L K+K A + E LS S ++AGD +++AD+S T+ L A + E YP++ +W
Sbjct: 135 ESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHFPTVYYLLASAHASVLEAYPRVKAW 194
Query: 208 L 206
+
Sbjct: 195 I 195
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.1 bits (72), Expect = 0.087
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 385 QGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPINEKE-YPKITSW 209
+ L K+K + E L+ ++AGD ++VAD+S VA L A + + YP + +W
Sbjct: 135 ENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAW 194
>10_08_0707 + 20037301-20037633,20037862-20038248
Length = 239
Score = 31.9 bits (69), Expect = 0.20
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Frame = -1
Query: 391 KPQGLAKIKSAYDFTEKFLSD----SPWIAGDDVTVADMSCVATIGSLDALLPI------ 242
K +G+ ++ +A + E L D P+ GD V + D++ I + A +
Sbjct: 128 KAEGMKQLLAAVETLEGALKDCSKGKPFFGGDTVGIVDVALGGLISWVKATEVLAGSKIF 187
Query: 241 NEKEYPKITSWLKRCSELDFYQRG-NNVKGLLEF 143
+E++ P + +W +R ELD ++ +V G++EF
Sbjct: 188 DEEKAPLLAAWAQRFGELDVAEKVLPDVDGVVEF 221
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 30.3 bits (65), Expect = 0.62
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -1
Query: 385 QGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMS 284
+ + K++ + E+ LS+S ++AGD V+VAD++
Sbjct: 135 ENVEKLRKVLEVYERRLSESEYLAGDFVSVADLN 168
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 385 QGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADM 287
Q AK+ D E++L ++ + AGD+ ++AD+
Sbjct: 141 QNEAKLVKVLDVYEQWLGENQYFAGDEFSLADL 173
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 27.9 bits (59), Expect = 3.3
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1
Query: 406 GETTFK--PQGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDAL-LPINE 236
G+T K + L K+K + E+ L ++AGD +++AD+S T L A
Sbjct: 125 GQTDAKVVEENLEKLKKTFQVYEERLCKFRYLAGDFLSLADLSHFPTAYYLLATPHAAML 184
Query: 235 KEYPKITSWL 206
E+P + +W+
Sbjct: 185 DEFPLVKAWI 194
>11_06_0768 + 27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 99 FYSFPRLKYCFSNALNSNRPFTLFPLW*KSSSEQRFNHEVILGYSFSLIGKSASKL 266
FY P L FS+ALN ++ T+ W + + +N + G+ + + S ++L
Sbjct: 1087 FYEVPSLSKSFSDALNKSQG-TVVSEWMQDPYQGVYNMDNSRGFDSAFVDSSCNEL 1141
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 376 AKIKSAYDFTEKFLSDSPWIAGDDVTVADM 287
AK+ + E+ LSDS ++AG+ T+AD+
Sbjct: 138 AKLDEVLEVYEQRLSDSEFLAGNKFTLADL 167
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -1
Query: 373 KIKSAYDFTEKFLSDSPWIAGDDVTVADMS 284
K++ + ++ LS + ++AGD+ T+AD+S
Sbjct: 146 KLQQVLNVYDEILSKNEYLAGDEFTLADLS 175
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 373 KIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVA-TIGSLDALLPINEKEYPKITSWLKR 200
K+K + E LS S ++AGD V+ AD++ T + YP + +W +R
Sbjct: 142 KLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWER 200
>04_03_1033 +
21861826-21863046,21863153-21863380,21863474-21863704,
21863808-21864070,21864189-21864660
Length = 804
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 370 IKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSL 260
I YD K L +P + +++ A S +AT+GSL
Sbjct: 669 ISELYDALVKLLDSNPDASTEEIVEAMASSLATVGSL 705
>07_03_0313 + 16620817-16621515
Length = 232
Score = 26.6 bits (56), Expect = 7.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 238 EKEYPKITSWLKRCSELD 185
E+E P++ +W +RC E D
Sbjct: 188 EEECPRVAAWARRCMERD 205
>06_03_0400 - 20420257-20421837
Length = 526
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 271 IGSLDALLPINEKEYPKITSWLKRCSELDFYQ 176
+G+ DALLP+ +P++ C+E+ + Q
Sbjct: 304 LGTCDALLPLVTSRFPELGVNRSHCNEMSWVQ 335
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 183 KSSSEQRFNHEVILGYSFSLIGKSASKLPIVATQLI-SATVTSSPAI 320
K S Q + E+ GYS I + K P+V T++ +A+V S+P I
Sbjct: 3114 KMESVQAGSEEIYHGYSDETIHSARIK-PVVGTEITENASVASAPVI 3159
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 370 IKSAYDFTEKFLSDSPWIAGDDVTVADMS 284
++ D E+ L ++ ++AGD T+AD+S
Sbjct: 198 LEKLLDIYEQRLEEAAYLAGDKFTIADLS 226
>01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294
Length = 199
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 385 QGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPINEKE-YPKITSW 209
+ L K+K A + E ++AGD +++AD+S L A + + YP + SW
Sbjct: 121 ENLGKLKKALEVYEARSCRFRYLAGDFISLADLSHFPMTHYLLATPHASVLDAYPHVKSW 180
Query: 208 L 206
+
Sbjct: 181 I 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,130,452
Number of Sequences: 37544
Number of extensions: 166662
Number of successful extensions: 441
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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