Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0291
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087794-12|AAG53708.1|  209|Caenorhabditis elegans Glutathione ...    31   0.42 
Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z93375-1|CAB07563.1|  328|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z80217-6|CAB02292.1|  227|Caenorhabditis elegans Hypothetical pr...    28   2.3  
AL132949-26|CAB61104.1|  209|Caenorhabditis elegans Hypothetical...    28   2.3  
U13876-17|AAA21167.1|  253|Caenorhabditis elegans Hypothetical p...    27   3.9  
AL132949-28|CAB61106.1|  209|Caenorhabditis elegans Hypothetical...    27   3.9  
AF067607-3|AAF98607.1|  590|Caenorhabditis elegans Hypothetical ...    27   5.2  
L23651-11|AAA27959.1|  250|Caenorhabditis elegans Hypothetical p...    26   9.1  

>AC087794-12|AAG53708.1|  209|Caenorhabditis elegans Glutathione
           s-transferase protein37 protein.
          Length = 209

 Score = 30.7 bits (66), Expect = 0.42
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 397 TFKPQGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKI 218
           TF P   A  KS      K  S S ++ GD +T AD+  V  + +L+     N  E PK+
Sbjct: 127 TFVPGRDAYFKSINKILGK--SKSGFLVGDKLTFADLVVVENVTTLEKNKLFNASEQPKL 184

Query: 217 TSWLKR 200
            +  K+
Sbjct: 185 AALRKK 190


>Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical
           protein F37B1.2 protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 334 SDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITSWLKR 200
           S S ++ GD +T AD+     + SL     +N  E PKI + L++
Sbjct: 146 SKSGYLIGDSITFADLFIAEDMQSLKNFGFLNATEQPKIAAHLEK 190


>Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical
           protein F37B1.8 protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -1

Query: 334 SDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITSWLKR 200
           S S ++ G+ +T AD+  V  + +L     +N  E PK+T+ L++
Sbjct: 144 SKSGFLIGNSITYADLVVVNNLETLRNFGFLNASEQPKLTALLEK 188


>Z93375-1|CAB07563.1|  328|Caenorhabditis elegans Hypothetical
           protein C38C6.3 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 99  FYSFPRLKYCFSNALNSNRPFTLFP---LW*KSSSEQRFNHE 215
           FYS   L  C S  L+SNRP   F    +  K +S++RF  E
Sbjct: 9   FYSLLLLNVCLSKPLDSNRPEDPFKTKFVSEKETSDERFESE 50


>Z80217-6|CAB02292.1|  227|Caenorhabditis elegans Hypothetical
           protein F37B1.6 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 328 SPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITS 212
           S ++ GDD+T+AD++    + SL        +E PK+ +
Sbjct: 166 SGYLVGDDITLADLAISENVDSLKNYGLFKAEEQPKLAA 204


>AL132949-26|CAB61104.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.30 protein.
          Length = 209

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 334 SDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITS 212
           S S ++ GD +T+AD+  V  I +LD        E PK+ +
Sbjct: 146 SKSGFLVGDGLTIADIVIVECITTLDKHQLFTASEQPKLVA 186


>U13876-17|AAA21167.1|  253|Caenorhabditis elegans Hypothetical
           protein F57B9.1 protein.
          Length = 253

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 123 YCFSNALNSNRPFTLFPLW*KS-SSEQRFNHEVILGYSFSLIGK 251
           Y   + L +  PF LF +W ++ +S+     E I   S S +GK
Sbjct: 49  YLLESKLPTTSPFELFDIWFRNVASQSDLTFEEINAVSLSTVGK 92


>AL132949-28|CAB61106.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.32 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = -1

Query: 334 SDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITS 212
           S S ++ GD +T AD+  V ++ +L+ +   +  E+PK+ +
Sbjct: 146 SKSGFLVGDGLTFADIVVVESLTNLEKVHFFDASEHPKLAA 186


>AF067607-3|AAF98607.1|  590|Caenorhabditis elegans Hypothetical
           protein C18H7.6 protein.
          Length = 590

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 63  LVIASDYAIIDFFYSFPRLKY 125
           L+IAS   ++ FFY  PR+ Y
Sbjct: 196 LIIASSLIMVSFFYYIPRMVY 216


>L23651-11|AAA27959.1|  250|Caenorhabditis elegans Hypothetical
           protein C29E4.7 protein.
          Length = 250

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 238 EKEYPKITSWLKRCSELDFYQ 176
           E+EYPK+T W ++    D  Q
Sbjct: 202 EEEYPKLTKWFQKMISSDVVQ 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,889,757
Number of Sequences: 27780
Number of extensions: 147970
Number of successful extensions: 385
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)