Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0291
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   3.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   9.4  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.4  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    20   9.4  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    20   9.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.4  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 QRFNHEVILGYSFSLIGKSASKLPIVATQLISATVT 305
           ++  H    GY + ++GK  + L I   +LI A  T
Sbjct: 406 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGT 441


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 QRFNHEVILGYSFSLIGKSASKLPIVATQLISATVT 305
           ++  H    GY + ++GK  + L I   +LI A  T
Sbjct: 496 RKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGT 531


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 241 NEKEYPKITSWLK 203
           NEK+ PK + W K
Sbjct: 209 NEKKIPKSSGWRK 221


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 190 LDFYQRGNNVKGLLEFKALLKQYLSR 113
           LD  + G +     + K+LLK+YLS+
Sbjct: 7   LDKLETGFSKLSSSDSKSLLKKYLSK 32


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 185 LLPERKQRKRPIGIQGV 135
           L PE   ++ P+G QG+
Sbjct: 79  LFPEDINKRAPMGFQGM 95


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 185 LLPERKQRKRPIGIQGV 135
           L PE   ++ P+G QG+
Sbjct: 80  LFPEDINKRAPMGFQGM 96


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 185 LLPERKQRKRPIGIQGV 135
           L PE   ++ P+G QG+
Sbjct: 79  LFPEDINKRAPMGFQGM 95


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 185 LLPERKQRKRPIGIQGV 135
           L PE   ++ P+G QG+
Sbjct: 79  LFPEDINKRAPMGFQGM 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,283
Number of Sequences: 438
Number of extensions: 1855
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)