Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0289
         (379 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3593|AAM68248.1|   82|Drosophila melanogaster CG30415-P...   108   2e-24
AE013599-3592|AAM68247.1|   82|Drosophila melanogaster CG30415-P...   108   2e-24
AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi esc...    28   4.6  
AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA...    28   4.6  
AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA...    27   6.1  
AE014298-3028|AAN09549.1| 1148|Drosophila melanogaster CG1695-PB...    27   8.0  
AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA...    27   8.0  

>AE013599-3593|AAM68248.1|   82|Drosophila melanogaster CG30415-PB,
           isoform B protein.
          Length = 82

 Score =  108 bits (260), Expect = 2e-24
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = +2

Query: 65  GRPMKFPYTFSAKIAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWA 244
           GRPM++PYTFSAKIAQFP K Y++N W+WRY+  A V   P+FYKI K++NSPEN   WA
Sbjct: 12  GRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAWA 71

Query: 245 EIRRKEAAEHH 277
           E + KE AEHH
Sbjct: 72  ESQAKEHAEHH 82


>AE013599-3592|AAM68247.1|   82|Drosophila melanogaster CG30415-PA,
           isoform A protein.
          Length = 82

 Score =  108 bits (260), Expect = 2e-24
 Identities = 45/71 (63%), Positives = 55/71 (77%)
 Frame = +2

Query: 65  GRPMKFPYTFSAKIAQFPYKFYLQNLWLWRYWAAAIVISSPLFYKIHKMSNSPENVSKWA 244
           GRPM++PYTFSAKIAQFP K Y++N W+WRY+  A V   P+FYKI K++NSPEN   WA
Sbjct: 12  GRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAWA 71

Query: 245 EIRRKEAAEHH 277
           E + KE AEHH
Sbjct: 72  ESQAKEHAEHH 82


>AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi escort
           protein protein.
          Length = 1276

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 43  PHDVGRPWSPHEVPLHVLSEDRSVPI*ILPPESVALALLGCRHRNFLTTLLQNSQNVKL 219
           PH  G PW P    L+  + DRS P  +LP    + A    +     T++L  ++ ++L
Sbjct: 131 PHPSGEPWPPEPQVLNSSTTDRSPPP-LLPWAQSSPAFFYVQQITLRTSVLPWTEGMQL 188


>AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA
           protein.
          Length = 1276

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 43  PHDVGRPWSPHEVPLHVLSEDRSVPI*ILPPESVALALLGCRHRNFLTTLLQNSQNVKL 219
           PH  G PW P    L+  + DRS P  +LP    + A    +     T++L  ++ ++L
Sbjct: 131 PHPSGEPWPPEPQVLNSSTTDRSPPP-LLPWAQSSPAFFYVQQITLRTSVLPWTEGMQL 188


>AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA
           protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 11  VFSIFS*FTYALTMSDAPGRPMKFPYTFSAKIAQFPYKFYLQNLWL-WRYWAAAIVISSP 187
           ++ +FS FTY + +      P+ FP  +   +A+FP +  LQ+L L    W  A+   + 
Sbjct: 47  IWRVFS-FTYNMVIL-----PVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTL 100

Query: 188 LFY 196
           + Y
Sbjct: 101 IVY 103


>AE014298-3028|AAN09549.1| 1148|Drosophila melanogaster CG1695-PB,
           isoform B protein.
          Length = 1148

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +1

Query: 43  PHDVGRPWSPHEVPLHVLSEDRSV-PI*ILPPESVALALLGCRHRNFLTTLLQNSQNV 213
           P    RP    +  LH  SED S        P SVA   +   H+N  TTLL    NV
Sbjct: 218 PPTTHRPIINFKRSLHTSSEDTSSGSFKACSPASVAKDYVESLHQNSRTTLLYGKNNV 275


>AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA,
           isoform A protein.
          Length = 1073

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +1

Query: 43  PHDVGRPWSPHEVPLHVLSEDRSV-PI*ILPPESVALALLGCRHRNFLTTLLQNSQNV 213
           P    RP    +  LH  SED S        P SVA   +   H+N  TTLL    NV
Sbjct: 218 PPTTHRPIINFKRSLHTSSEDTSSGSFKACSPASVAKDYVESLHQNSRTTLLYGKNNV 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,897,461
Number of Sequences: 53049
Number of extensions: 350288
Number of successful extensions: 890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)