Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0280
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-P...    72   3e-13
BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p pro...    70   1e-12

>AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-PB
           protein.
          Length = 126

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +1

Query: 196 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDG 369
           MA +KGL   AF   IG+TF+ILACA+P  K+++PFFV+LFY+L  +P  IARR T G
Sbjct: 1   MATLKGLFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTTPG 58


>BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p
           protein.
          Length = 126

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = +1

Query: 196 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDG 369
           MA +K L   AF   IG+TF+ILACA+P  K+++PFFV+LFY+L  +P  IARR T G
Sbjct: 1   MATLKALFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTTPG 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,795,700
Number of Sequences: 53049
Number of extensions: 348812
Number of successful extensions: 621
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)