Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0279
         (332 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092825-1|BAC03985.1|  151|Homo sapiens protein ( Homo sapiens ...    29   2.6  
BC000980-1|AAH00980.1|  502|Homo sapiens interleukin 17 receptor...    28   6.0  
AY518533-1|AAR89910.1|  502|Homo sapiens interleukin 17 receptor...    28   6.0  
AY359122-1|AAQ89956.1|  502|Homo sapiens IL17BR protein.               28   6.0  
AF250309-1|AAK37428.1|  502|Homo sapiens putative cytokine recep...    28   6.0  

>AK092825-1|BAC03985.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35506 fis, clone SMINT2009415. ).
          Length = 151

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/56 (39%), Positives = 28/56 (50%)
 Frame = +3

Query: 153 RQYFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQ 320
           RQ  R  + ALV F  + H ++ +K EGVC H    G    G G     ERRP+ Q
Sbjct: 92  RQSSRLEAGALVGFY-VEHGVSLLKGEGVCGHPG-GGGERKGPGAGAGLERRPQSQ 145


>BC000980-1|AAH00980.1|  502|Homo sapiens interleukin 17 receptor B
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 55  INIKINYNLLSLCGRFHLDESLLEVAFCASV 147
           I+ K +YN LS+C ++HL +     AFCA +
Sbjct: 451 IDTKDDYNALSVCPKYHLMKD--ATAFCAEL 479


>AY518533-1|AAR89910.1|  502|Homo sapiens interleukin 17 receptor B
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 55  INIKINYNLLSLCGRFHLDESLLEVAFCASV 147
           I+ K +YN LS+C ++HL +     AFCA +
Sbjct: 451 IDTKDDYNALSVCPKYHLMKD--ATAFCAEL 479


>AY359122-1|AAQ89956.1|  502|Homo sapiens IL17BR protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 55  INIKINYNLLSLCGRFHLDESLLEVAFCASV 147
           I+ K +YN LS+C ++HL +     AFCA +
Sbjct: 451 IDTKDDYNALSVCPKYHLMKD--ATAFCAEL 479


>AF250309-1|AAK37428.1|  502|Homo sapiens putative cytokine receptor
           CRL4 precusor protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 55  INIKINYNLLSLCGRFHLDESLLEVAFCASV 147
           I+ K +YN LS+C ++HL +     AFCA +
Sbjct: 451 IDTKDDYNALSVCPKYHLMKD--ATAFCAEL 479


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,652,387
Number of Sequences: 237096
Number of extensions: 883672
Number of successful extensions: 1813
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)