Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0279
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p pro...    31   0.48 
AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA...    31   0.48 
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot...    28   3.4  
AE014296-2674|AAS64988.1|  207|Drosophila melanogaster CG13067-P...    28   3.4  
AF038582-1|AAB97002.1|  425|Drosophila melanogaster QKR54B protein.    27   5.9  

>AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p
           protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 67  INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 192
           +N   L+L  +  L  ++ +V   +SVC G T+DI+ + L F
Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155


>AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA
           protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 67  INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 192
           +N   L+L  +  L  ++ +V   +SVC G T+DI+ + L F
Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155


>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
           protein.
          Length = 1349

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 182 CV*RMSKVLPLHTLAQKATSNNDSSR 105
           CV R S+++P HTL+ K     D +R
Sbjct: 14  CVLRRSRLMPTHTLSSKTVPGLDETR 39


>AE014296-2674|AAS64988.1|  207|Drosophila melanogaster CG13067-PB,
           isoform B protein.
          Length = 207

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 254 PVWLWVCWPRKTHAIR 301
           P+W W+C P  TH +R
Sbjct: 115 PIWEWMCIPMATHHLR 130


>AF038582-1|AAB97002.1|  425|Drosophila melanogaster QKR54B protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 205 RILEKITSAFDVCRKYCLYTHWRRRRLPTMTRLDENVRTKTTDC 74
           RIL   T  F   R+ C   HWRR  +    RL    ++++  C
Sbjct: 382 RILSAFTRLFCWRRRRCRSGHWRRFSIKCHRRLWSQFQSQSQPC 425


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,102,699
Number of Sequences: 53049
Number of extensions: 290196
Number of successful extensions: 710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)