Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0278
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   4.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   4.6  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 122 KHKHERPRPT*DCDY 78
           +H HERP    +CDY
Sbjct: 205 RHTHERPHKCTECDY 219


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 196 SNERRGHTAARPTLRHADAWFRALINTSTSGP 101
           ++ER  HTA +P+L    A   A +N     P
Sbjct: 16  TSERTSHTATKPSLAAVTAKSSAKVNQFQQPP 47


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 196 SNERRGHTAARPTLRHADAWFRALINTSTSGP 101
           ++ER  HTA +P+L    A   A +N     P
Sbjct: 16  TSERTSHTATKPSLAAVTAKSSAKVNQFQQPP 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,425
Number of Sequences: 2352
Number of extensions: 12105
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)