Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0278
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.             30   5.5  
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.              30   5.5  
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.     30   5.5  
Z48042-1|CAA88096.1|  649|Homo sapiens GPI-anchored protein p137...    29   9.5  
BC000090-1|AAH00090.1|  191|Homo sapiens Unknown (protein for IM...    29   9.5  

>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
          Length = 1255

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 330 VDSCSEAVTQ------PATVRAVASDIHAVISVSPGAH*AVNGPEARPSSEAMSGVGT 175
           ++SC+EA T       PA V A+ S      +VSPG H     P +R +S   +GVGT
Sbjct: 594 LESCNEAATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSR--TGVGT 649


>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
          Length = 1255

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 330 VDSCSEAVTQ------PATVRAVASDIHAVISVSPGAH*AVNGPEARPSSEAMSGVGT 175
           ++SC+EA T       PA V A+ S      +VSPG H     P +R +S   +GVGT
Sbjct: 594 LESCNEAATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSR--TGVGT 649


>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
          Length = 1281

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 330 VDSCSEAVTQ------PATVRAVASDIHAVISVSPGAH*AVNGPEARPSSEAMSGVGT 175
           ++SC+EA T       PA V A+ S      +VSPG H     P +R +S   +GVGT
Sbjct: 620 LESCNEAATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSR--TGVGT 675


>Z48042-1|CAA88096.1|  649|Homo sapiens GPI-anchored protein p137
           protein.
          Length = 649

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 270 IHAVISVSPGAH*AVNGPE-ARPSSEAMSGVGTPRPDRHFDTPMRGSE 130
           IH++ SV PG   A+NG + +R SSEA+  V    P    + P   +E
Sbjct: 598 IHSLSSVLPGITLAINGMDISRISSEALGRVDHGEPHEVVEGPQDPTE 645


>BC000090-1|AAH00090.1|  191|Homo sapiens Unknown (protein for
           IMAGE:3504121) protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 183 RRSLLHWMDELPARLRLSAHRGSQRSPRG-CHWPQPSQSRAA 305
           R ++L W D LP R    A   S+  P G C W  PS   AA
Sbjct: 125 RDTILDWEDSLPDRDLALADEASRSGPAGTCRW-LPSAGEAA 165


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,806,672
Number of Sequences: 237096
Number of extensions: 1778645
Number of successful extensions: 3800
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)