Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0277
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.35 
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   7.4  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   7.4  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 569 GTGSVGLPSVPSQQAHSHSSREKQNEIFQSSPSH**GRCKEHS 441
           G G  G   +PSQQ H    +++Q+ +    P H  G  ++HS
Sbjct: 238 GAGVQGAGPIPSQQKHQQHQQQQQSVLL---PKH--GTARQHS 275


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -3

Query: 159 AHRVEELYRHHNPFCEKYVFFHYFFI 82
           A+  +E+YR+     E+Y+ + +FF+
Sbjct: 57  AYVTQEIYRYAQDRGERYMGYSFFFM 82


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 311 VPQERNFCCKVFQDC 267
           V Q+R  CC+ + DC
Sbjct: 408 VKQDRPICCQEYADC 422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,073
Number of Sequences: 2352
Number of extensions: 12618
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)