Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0277
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003359-1|AAH03359.1| 306|Homo sapiens chromosome 20 open read... 118 1e-26
AL109806-3|CAC03740.1| 306|Homo sapiens chromosome 20 open read... 118 1e-26
AL109806-2|CAM27632.1| 230|Homo sapiens chromosome 20 open read... 118 1e-26
AK000481-1|BAA91193.1| 306|Homo sapiens protein ( Homo sapiens ... 118 1e-26
AF212244-1|AAK14929.1| 306|Homo sapiens CDA05 protein. 118 1e-26
AF117231-1|AAF17212.1| 306|Homo sapiens protein x 0001 protein. 118 1e-26
AL109806-1|CAM27631.1| 277|Homo sapiens chromosome 20 open read... 117 3e-26
BC002769-1|AAH02769.1| 42|Homo sapiens C20orf43 protein protein. 38 0.020
>BC003359-1|AAH03359.1| 306|Homo sapiens chromosome 20 open reading
frame 43 protein.
Length = 306
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AL109806-3|CAC03740.1| 306|Homo sapiens chromosome 20 open reading
frame 43 protein.
Length = 306
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AL109806-2|CAM27632.1| 230|Homo sapiens chromosome 20 open reading
frame 43 protein.
Length = 230
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AK000481-1|BAA91193.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ20474 fis, clone KAT07183. ).
Length = 306
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AF212244-1|AAK14929.1| 306|Homo sapiens CDA05 protein.
Length = 306
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AF117231-1|AAF17212.1| 306|Homo sapiens protein x 0001 protein.
Length = 306
Score = 118 bits (285), Expect = 1e-26
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+K + DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAF 164
Score = 39.5 bits (88), Expect = 0.009
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQI 191
MGCDGGTIP+R ELV+ KK E++
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKV 24
>AL109806-1|CAM27631.1| 277|Homo sapiens chromosome 20 open reading
frame 43 protein.
Length = 277
Score = 117 bits (282), Expect = 3e-26
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Frame = +2
Query: 170 EKEARTDKDAERSFKWRNCALSQQILQEPIVACSLGRLYSKSSVLEALLDKETRP---ES 340
+ E DKDAE +W C LSQ+IL+ PIVAC LGRLY+K +V+E LLDK ++
Sbjct: 49 DMEYDVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 108
Query: 341 INHXXXXXXXXXXXXXXXPAYV-PTDHTDGTF--DNGSAPYICPISGLEMTGKFRFVFLW 511
+H PA+ +T G D A +ICP+ GLEM G+ RF FL
Sbjct: 109 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 168
Query: 512 SCGCVLAERALKEVRQNLCHMCQQPF 589
CGCV +ERALKE++ +CH C F
Sbjct: 169 CCGCVFSERALKEIKAEVCHTCGAAF 194
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQIKMLKEVSSGVIVRSRSKYYKNQ*W 263
MGCDGGTIP+R ELV+ KK E+I LK + S K + W
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEKIWHLKNGKEWCSLHSEGKNKNGKEW 48
>BC002769-1|AAH02769.1| 42|Homo sapiens C20orf43 protein protein.
Length = 42
Score = 38.3 bits (85), Expect = 0.020
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 120 MGCDGGTIPRRDELVRMKKKPEQ 188
MGCDGGTIP+R ELV+ KK E+
Sbjct: 1 MGCDGGTIPKRHELVKGPKKVEK 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,582,534
Number of Sequences: 237096
Number of extensions: 1712774
Number of successful extensions: 4590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4583
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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