Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0262
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.3  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.3  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF----NLIVPC 222


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF----NLIVPC 222


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF----NLIVPC 222


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF----NLIVPC 222


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF----NLIVPC 222


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 57  IGVFVKVIICYYVCYGSRITG 119
           +G ++     YYVC    ITG
Sbjct: 125 LGQYINYETDYYVCLAMTITG 145


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 378 VYIKTELFFFILLLKWVFPVFM 443
           ++I  ELFF ILL    F  FM
Sbjct: 132 IFITCELFFVILLWISFFLNFM 153


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 673 CGNKISRNIFV 705
           CGNKI  ++FV
Sbjct: 640 CGNKIDTSLFV 650


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,425
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)