Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0262
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.3  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   3.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   3.1  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   4.1  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          23   9.4  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    23   9.4  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   9.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 336  RPLIFSIIIRYYYDVYIKTELFFFILLLKWV 428
            RP++  I+  YY D  I T +FF  +L+KW+
Sbjct: 1332 RPILQDIL--YYMD-RIFTVIFFLEMLIKWL 1359


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N  +  CC   Y      I I  R   YFF    +L+ PC
Sbjct: 205 KKNTITYQCCPEPYVDITFTIQIRRRTLYYFF----NLIVPC 242


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           K+N  +  CC   Y      I I  R   YFF    +L+ PC
Sbjct: 205 KKNTITYQCCPEPYVDITFTIQIRRRTLYYFF----NLIVPC 242


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           KRN     CC   Y      I I  R   YFF    +L+ PC
Sbjct: 220 KRNEIYYNCCPEPYIDITFAIIIRRRTLYYFF----NLIVPC 257


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 SSYCC*SGYFQFLCKIYISNRLN 471
           + Y C SGY    CKI   N LN
Sbjct: 77  NKYWCDSGYGSNDCKIACKNLLN 99


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 SSYCC*SGYFQFLCKIYISNRLN 471
           + Y C SGY    CKI   N LN
Sbjct: 77  NKYWCDSGYGSNDCKIACKNLLN 99


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
           KRN     CC   Y      I I  +   YFF    +L+ PC
Sbjct: 188 KRNEIYYNCCPEPYIDITFAILIRRKTLYYFF----NLIVPC 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,723
Number of Sequences: 2352
Number of extensions: 13536
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)