Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0262
(709 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.1
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 5.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 5.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.7
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 205
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 273
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
K+N + CC Y I I R YFF +L+ PC
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF----NLIVPC 273
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 388 KRNFFSSYCC*SGYFQFLCKIYISNRLNTYFFKRRKHLLEPC 513
KRN CC Y + I R YFF +L+ PC
Sbjct: 205 KRNEIYYNCCPEPYIDITFVVIIRRRTLYYFF----NLIVPC 242
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 105 NHSIHNSRL*L*QKHQYIYQIPIFN 31
++S+H R L ++H+Y +Q+ +N
Sbjct: 42 SNSVHGHREGLGRRHRYNFQLKPYN 66
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 105 NHSIHNSRL*L*QKHQYIYQIPIFN 31
++S+H R L ++H+Y +Q+ +N
Sbjct: 43 SNSVHGHREGLGRRHRYNFQLKPYN 67
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 91 NYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 324 NYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 83 DYNFDKNTNIYTKYLY 36
+YN++ N N Y K+ Y
Sbjct: 324 NYNYNNNYNNYNKHNY 339
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,831
Number of Sequences: 438
Number of extensions: 3872
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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