Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0256
         (383 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001555D5D Cluster: PREDICTED: similar to putative z...    31   5.7  
UniRef50_A1WEA1 Cluster: Putative uncharacterized protein; n=1; ...    31   5.7  
UniRef50_Q750T3 Cluster: AGL144Cp; n=1; Eremothecium gossypii|Re...    31   7.5  
UniRef50_Q5QY67 Cluster: 3-deoxy-D-manno-octulosonic-acid transf...    31   9.9  

>UniRef50_UPI0001555D5D Cluster: PREDICTED: similar to putative zinc
           finger protein; n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to putative zinc finger protein -
           Ornithorhynchus anatinus
          Length = 602

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 108 LRYDSELRCTQQFCRSCVSRHY 43
           LR+   L C  QFCRSC+SR +
Sbjct: 58  LRHPVTLHCGHQFCRSCLSRRW 79


>UniRef50_A1WEA1 Cluster: Putative uncharacterized protein; n=1;
           Verminephrobacter eiseniae EF01-2|Rep: Putative
           uncharacterized protein - Verminephrobacter eiseniae
           (strain EF01-2)
          Length = 270

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 6   ASRLVDPPGCRTNSAATHSCGRTAACSVVRNH 101
           A+ +++PP C T+    H  G +A+ +V R H
Sbjct: 59  ATAMIEPPACATDRRLRHGLGASASGAVARRH 90


>UniRef50_Q750T3 Cluster: AGL144Cp; n=1; Eremothecium gossypii|Rep:
           AGL144Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 339

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 365 SYKRTFHEPNLPKHSHS*LCDIFQSALNVIYYFITD 258
           +++  F+ PNLPKH H+ L + F   L + Y  + D
Sbjct: 204 AFRLFFNAPNLPKHRHAELINRFAVRLRMFYNTLLD 239


>UniRef50_Q5QY67 Cluster: 3-deoxy-D-manno-octulosonic-acid
           transferase; n=2; Idiomarina|Rep:
           3-deoxy-D-manno-octulosonic-acid transferase -
           Idiomarina loihiensis
          Length = 661

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -3

Query: 114 GNLRYDSELRCTQ-----QFCRSCVSRHYWSCSPGDP 19
           GNL+YD EL  T       + +SC SRH W  S   P
Sbjct: 206 GNLKYDIELSVTDIEKALLWRQSCASRHVWLASSSHP 242


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,565,052
Number of Sequences: 1657284
Number of extensions: 4876221
Number of successful extensions: 10942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10941
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)