Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0255
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 267 WCYFDTNAISWLNII 223
           +CYF  NA +W N +
Sbjct: 538 FCYFRRNAATWKNAV 552


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 351 FHDKN*AIVDIHTHSES 301
           F  KN  IVD HT SES
Sbjct: 352 FQMKNVTIVDHHTASES 368


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 203 YHWHYHL 183
           +HWH+HL
Sbjct: 208 HHWHWHL 214


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 472 HINR*HKDQSWKTNN 428
           H+ R H D  WK  N
Sbjct: 509 HLPRIHHDAEWKVGN 523


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 472 HINR*HKDQSWKTNN 428
           H+ R H D  WK  N
Sbjct: 424 HLPRIHHDAEWKVGN 438


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 472 HINR*HKDQSWKTNN 428
           H+ R H D  WK  N
Sbjct: 743 HLPRIHHDAEWKVGN 757


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,180
Number of Sequences: 438
Number of extensions: 2251
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)