Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0254
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 229 8e-61
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 229 8e-61
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 229 8e-61
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 229 8e-61
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 229 8e-61
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 229 8e-61
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 228 1e-60
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 228 1e-60
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 228 1e-60
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 222 9e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 215 1e-56
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 108 2e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 103 5e-23
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 79 9e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 64 3e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 64 3e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 64 4e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 60 5e-10
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.24
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.24
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.24
AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical ... 30 0.74
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 1.7
U41552-8|AAC69099.2| 771|Caenorhabditis elegans Hypothetical pr... 27 3.9
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 27 5.2
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 27 5.2
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 27 5.2
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81489-5|CAB04006.1| 104|Caenorhabditis elegans Hypothetical pr... 26 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 186 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 245
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 246 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 297
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 170 KEKLCYVALDFEQEMA---TAASSSSL 193
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 216 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 275
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 276 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 327
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 200 KEKLCYVALDFEQEMA---TAASSSSL 223
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 229 bits (559), Expect = 8e-61
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 228 bits (557), Expect = 1e-60
Identities = 105/112 (93%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 228 bits (557), Expect = 1e-60
Identities = 105/112 (93%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 228 bits (557), Expect = 1e-60
Identities = 105/112 (93%), Positives = 110/112 (98%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 222 bits (542), Expect = 9e-59
Identities = 104/112 (92%), Positives = 109/112 (97%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YN IMKCD+D
Sbjct: 230 TAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDID 289
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVW
Sbjct: 290 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVW 340
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVALDFEQEMA AA S SL
Sbjct: 214 KEKLCYVALDFEQEMA---TAASSSSL 237
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 215 bits (524), Expect = 1e-56
Identities = 100/111 (90%), Positives = 104/111 (93%)
Frame = +1
Query: 76 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDI 255
AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY IMKCDVDI
Sbjct: 230 AASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDI 289
Query: 256 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
RKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVW
Sbjct: 290 RKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVW 340
Score = 31.1 bits (67), Expect = 0.32
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 26 REKLCYVALDFEQEMAPLHPAAPSRSL 106
+EKLCYVA DFE E+A AA S SL
Sbjct: 213 KEKLCYVAHDFESELA---AAASSSSL 236
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 108 bits (259), Expect = 2e-24
Identities = 52/114 (45%), Positives = 69/114 (60%)
Frame = +1
Query: 67 DGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCD 246
D T ++S++ SY LPD I I N FR PE LF+P +G E G+ IMKCD
Sbjct: 226 DPTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCD 285
Query: 247 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
VD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER W
Sbjct: 286 VDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTW 339
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 103 bits (247), Expect = 5e-23
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Frame = +1
Query: 76 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDI 255
A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D
Sbjct: 234 ALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDT 293
Query: 256 RKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYS 402
R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+
Sbjct: 294 RLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHM 353
Query: 403 VW 408
V+
Sbjct: 354 VF 355
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 26 REKLCYVALDFEQE 67
+EKLCY+A D EQE
Sbjct: 217 KEKLCYIAYDVEQE 230
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 79.4 bits (187), Expect = 9e-16
Identities = 31/86 (36%), Positives = 56/86 (65%)
Frame = +1
Query: 136 IGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYPGI 315
I N RF C E LF+P G++ G+H+ + I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 316 ADRMQKEITALAPSTMKIKIIAPPER 393
A+++++E++ + P+T+ ++ P R
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWR 513
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 64.5 bits (150), Expect = 3e-11
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +1
Query: 130 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYP 309
I +G ERF PE LF PS + ++ CG+ E I +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 310 GIADRMQKEITALAPSTMKIKI 375
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 64.5 bits (150), Expect = 3e-11
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +1
Query: 130 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYP 309
I +G ERF PE LF PS + ++ CG+ E I +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 310 GIADRMQKEITALAPSTMKIKI 375
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 130 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMY 306
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 307 PGIADRMQKEITALAPSTMKI 369
A ++Q+++ L+ +++
Sbjct: 336 KDFARKLQRDVKRLSDGRLQM 356
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 60.5 bits (140), Expect = 5e-10
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Frame = +1
Query: 106 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNFIMKCDVDIRKDLY 270
Y P+G G ER + PE LF +L E + + D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 271 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVW 408
+N ++GG ++ G +R+ + P T+K+++ A P ERKY W
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAW 401
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 223 YNFIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKII 378
+ + KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I
Sbjct: 195 HKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCD 337
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCD 337
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCD 337
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical
protein H32C10.1 protein.
Length = 414
Score = 29.9 bits (64), Expect = 0.74
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 296 VPPDNTVLAYKSLRMSTSHFMMKLYVVSWMPQASIPKNEGWKRASGQRNLSFP-MVMT*P 120
VP DN ++++ LRM T ++ VV +I K + R ++ + +V P
Sbjct: 85 VPADNVLMSHSPLRMFTDLHDKQVLVVGQKNARAIAKGIIFFRVGFKKVTTIDHLVKWFP 144
Query: 119 SGSS*DFSRELLDAAVPSPARSQERRSTASLSL 21
DFSR+L+D AR + R A + L
Sbjct: 145 HLDCTDFSRKLVDPKETEAARKRFRPIEAIVML 177
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 74 PLHPAAPSRSLTNFPTVRSSPSE 142
PLHPA P L N P SSP+E
Sbjct: 148 PLHPAHPLLPLRNMPYDSSSPTE 170
>U41552-8|AAC69099.2| 771|Caenorhabditis elegans Hypothetical
protein K07E3.2 protein.
Length = 771
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -2
Query: 209 MPQASIPKNEG----WKRASGQRNLSFPMVMT*PSGSS*DFSRELLDAAVPSPARSQER 45
+P A +NEG +K+ + +P+V+ P + DF E ++ P SQER
Sbjct: 595 IPDAESERNEGFAIVYKKLKKLDAIFYPVVLDLPVAAFKDFREENMELFKDLPVESQER 653
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 23 EREKLCYVALDFEQEMAPLHPAAPSRSLTNFPTVRSS 133
EREK+ V + E EM P S+ T P+V SS
Sbjct: 1229 EREKIMSVMANAEMEMGARFPPPSSQIPTRSPSVMSS 1265
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 159 PRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 257
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 159 PRGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 257
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCDF 334
PYG LP W + +NL G DF
Sbjct: 551 PYGYLPCWNNRLINLWSAPGYGSDF 575
>Z81489-5|CAB04006.1| 104|Caenorhabditis elegans Hypothetical
protein C55A1.6 protein.
Length = 104
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 89 APSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITSS*SAT 247
A S + NFPTV S +E KD+ + S + S + A+ P + S+ A+
Sbjct: 16 ATSAAPVNFPTVEESKTELKDAGMTQASIDQLSAFTQRFATGYPVVQSNKEAS 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,125,917
Number of Sequences: 27780
Number of extensions: 208082
Number of successful extensions: 715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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