Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0254
(408 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 210 4e-55
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 207 3e-54
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 206 3e-54
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 206 3e-54
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 206 3e-54
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 206 4e-54
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 206 4e-54
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 198 1e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 198 1e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 194 1e-50
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 181 2e-46
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 2e-35
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 94 3e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 86 7e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 83 7e-17
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 71 2e-13
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 60 6e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 58 2e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 46 1e-05
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative... 33 0.097
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 32 0.17
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 30 0.52
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 29 0.91
At1g30530.1 68414.m03735 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.6
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 2.8
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 28 2.8
At5g43500.2 68418.m05318 expressed protein 27 3.7
At5g43500.1 68418.m05319 expressed protein 27 3.7
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 3.7
At1g73090.1 68414.m08451 expressed protein 27 3.7
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 27 3.7
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 27 4.8
At4g35900.1 68417.m05099 DNA-binding protein-related weak simila... 27 4.8
At2g01910.1 68415.m00125 microtubule associated protein (MAP65/A... 27 4.8
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 27 4.8
At1g44160.1 68414.m05100 DNAJ chaperone C-terminal domain-contai... 27 6.4
At5g58410.1 68418.m07314 expressed protein contains similarity t... 26 8.5
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 26 8.5
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 26 8.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 210 bits (512), Expect = 4e-55
Identities = 96/112 (85%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TA +SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYN IMKCDVD
Sbjct: 231 TANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 29.5 bits (63), Expect = 0.91
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL Y+ALD+EQEM
Sbjct: 215 KEKLAYIALDYEQEM 229
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 207 bits (505), Expect = 3e-54
Identities = 95/112 (84%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TA SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYN IMKCDVD
Sbjct: 231 TAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL YVALD+EQE+
Sbjct: 215 KEKLAYVALDYEQEL 229
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 206 bits (504), Expect = 3e-54
Identities = 94/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYN IMKCDVD
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL +VA+D+EQEM
Sbjct: 215 KEKLSFVAVDYEQEM 229
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 206 bits (504), Expect = 3e-54
Identities = 94/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYN IMKCDVD
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL +VA+D+EQEM
Sbjct: 215 KEKLSFVAVDYEQEM 229
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 206 bits (504), Expect = 3e-54
Identities = 94/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYN IMKCDVD
Sbjct: 231 TSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL +VA+D+EQEM
Sbjct: 215 KEKLSFVAVDYEQEM 229
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 206 bits (503), Expect = 4e-54
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYN IMKCDVD
Sbjct: 231 TAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKLCY+ALD+EQE+
Sbjct: 215 KEKLCYIALDYEQEL 229
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 206 bits (503), Expect = 4e-54
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYN IMKCDVD
Sbjct: 231 TAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKLCY+ALD+EQE+
Sbjct: 215 KEKLCYIALDYEQEL 229
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 1e-51
Identities = 91/112 (81%), Positives = 100/112 (89%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYN IMKCDVD
Sbjct: 231 TSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL Y+ALDFEQE+
Sbjct: 215 KEKLSYIALDFEQEL 229
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 1e-51
Identities = 91/112 (81%), Positives = 100/112 (89%)
Frame = +1
Query: 73 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVD 252
T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYN IMKCDVD
Sbjct: 231 TSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVD 290
Query: 253 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
IRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVW
Sbjct: 291 IRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKL Y+ALD+EQE+
Sbjct: 215 KEKLSYIALDYEQEL 229
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 194 bits (474), Expect = 1e-50
Identities = 87/111 (78%), Positives = 98/111 (88%)
Frame = +1
Query: 76 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDI 255
A +SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYN IMKCDVDI
Sbjct: 233 ATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDI 292
Query: 256 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
RKDLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW
Sbjct: 293 RKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVW 343
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKLCY+A+D+EQEM
Sbjct: 216 KEKLCYIAVDYEQEM 230
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 181 bits (440), Expect = 2e-46
Identities = 82/111 (73%), Positives = 93/111 (83%)
Frame = +1
Query: 76 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDI 255
A SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYN IMKCD DI
Sbjct: 184 ATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDI 243
Query: 256 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
RKDLY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVW
Sbjct: 244 RKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVW 294
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (349), Expect = 2e-35
Identities = 62/106 (58%), Positives = 81/106 (76%)
Frame = +1
Query: 91 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLY 270
+++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T N I+KC VD R+D+Y
Sbjct: 226 TIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMY 285
Query: 271 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVW
Sbjct: 286 GNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVW 331
Score = 33.5 bits (73), Expect = 0.056
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 26 REKLCYVALDFEQEM 70
+EKLCYVALD+EQEM
Sbjct: 204 KEKLCYVALDYEQEM 218
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 94.3 bits (224), Expect = 3e-20
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Frame = +1
Query: 94 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYA 273
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I + D+D R LY
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQ 296
Query: 274 NTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVW 408
+ VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V+
Sbjct: 297 HIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVY 352
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.2 bits (204), Expect = 7e-18
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 15/117 (12%)
Frame = +1
Query: 103 SYELPDGQVITIGNERFRCPEALFQPSFL----GMEAC--------GIHETTYNFIMKCD 246
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ I KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 247 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVW 408
VDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVW
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVW 406
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 83.0 bits (196), Expect = 7e-17
Identities = 44/97 (45%), Positives = 55/97 (56%)
Frame = +1
Query: 100 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYANT 279
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 280 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 390
VL GGTT G R QKE L S ++ ++ PPE
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPE 316
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 71.3 bits (167), Expect = 2e-13
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = +1
Query: 130 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYP 309
I + NERF PE LFQP+ LGM G+ E I C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 310 GIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
+ +R++ E+ L P +KI + VW
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVW 385
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 60.1 bits (139), Expect = 6e-10
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Frame = +1
Query: 67 DGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNFIMKCD 246
D A S + S E+ T+ ERF+ E LFQP GM A +H+ + CD
Sbjct: 322 DYKAELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCD 381
Query: 247 -VDIRKD--LYANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVW 408
+ D + VL+GG+ PG+++R+++E+ PS++ I++I PP + W
Sbjct: 382 AAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSW 440
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEMA 73
+EKLCYVALD++ E++
Sbjct: 313 KEKLCYVALDYKAELS 328
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 58.0 bits (134), Expect = 2e-09
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Frame = +1
Query: 130 ITIGNERFRCPEALFQPSFLGMEACGIHE---TTYNFIMKCDVDIRKDLYANTVLSGGTT 300
I IG ERFRCPE LF P+ +G++ G+ E T+ + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 301 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 408
+ PG+ +R++ I + P I ++ + W
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAW 684
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 136 IGNERFRCPEALFQPSFLGME-ACGIHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYPG 312
+G ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 313 IADRMQKEI 339
R+Q+++
Sbjct: 340 FGRRLQRDL 348
>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
similar to zeta-crystallin homolog TED2 from Zinnia
elegans [gi:531096]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 406
Score = 32.7 bits (71), Expect = 0.097
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -1
Query: 165 LWATESFVSDGDDLTVGKFVRLLEGAAG---CSGAISCSKSRAT*HSFSLSPAXPGDP 1
++ E FVS +D+T GK V ++ + G G+++C KSR SF S P DP
Sbjct: 273 MYKNEDFVSRVNDITSGKGVNVVYDSVGKDTFKGSLACLKSRGYMVSFGQSSGSP-DP 329
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 208 IHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 387
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 388 ERKYS 402
+RK++
Sbjct: 393 DRKHA 397
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 67 DGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNF 231
D A S + S E+ T+ ERF+ E LFQP G+ +H+ Y F
Sbjct: 322 DYKAELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLVYEF 373
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +2
Query: 26 REKLCYVALDFEQEMA 73
+EKLCYVALD++ E++
Sbjct: 313 KEKLCYVALDYKAELS 328
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 29.5 bits (63), Expect = 0.91
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 71 APLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITSS*SAT 247
+PLH ++P +F + ++ + AQ +S+PR W+ + A S+ TSS S +
Sbjct: 138 SPLHSSSPF----SFGSAPAAITSVSSGPAQSPASSPRLWIDRFATSSSASATSSSSTS 192
>At1g30530.1 68414.m03735 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 453
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 86 AAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHI 226
+A S + +F TV P E ++AQ L S+ +VW L H+
Sbjct: 269 SAASVAYISFGTVMEPPPEELVAIAQGLESSKVPFVWSLKEKNMVHL 315
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCDF 334
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRW-GESCD 337
P GVL W S+ + HC W G SC+
Sbjct: 46 PNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 EACGIHETTYNFIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 372
E G+ E + I+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 373 II 378
+
Sbjct: 518 TV 519
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 EACGIHETTYNFIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 372
E G+ E + I+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 373 II 378
+
Sbjct: 530 TV 531
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 408 PYGVLPLWRSNDLNLHCRWGESCDF 334
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
>At1g73090.1 68414.m08451 expressed protein
Length = 306
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 50 LDFEQEMAPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTR 217
LD +E+ PL PA+ + + + + P E + + Q L S W++ ASTR
Sbjct: 84 LDPPKELIPLDPASYNPAAYLWKKIEDIPEERRHHLLQLLEPRLISRAWEI-ASTR 138
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 395 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSHFM 234
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.1 bits (57), Expect = 4.8
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 2 GSPGXAGEREKLCYVALDFE-QEMAPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSN 178
G+ + +KL V L Q AP H PS S T P S S + A S
Sbjct: 112 GNQDHCQKGQKLIVVVLAVRNQPSAPAHSPVPSVSPTQPPKSHSPVSPVAPASAPSKSQP 171
Query: 179 PRSWV 193
PRS V
Sbjct: 172 PRSSV 176
>At4g35900.1 68417.m05099 DNA-binding protein-related weak
similarity to DNA-binding factor gmlip15 [Zea mays]
GI:14289167
Length = 245
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 65 EMAPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVW 196
+++ + ++PS S ++ T SSP ++DS AQ+ S VW
Sbjct: 24 KVSSISSSSPSSSSSSSSTSSSSPLPSQDSQAQKRSLVTMEEVW 67
>At2g01910.1 68415.m00125 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 567
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 11 GXAGEREKLCYV-ALDFEQEMAPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRS 187
G E LC V +DF Q ++ +HP+ + S E + + Q+L + +S
Sbjct: 152 GYVNEVHALCGVLGVDFSQTVSAVHPSLHRTDQEQSTNISDSTLEGLEHMIQKLKTERKS 211
Query: 188 WVWKL 202
KL
Sbjct: 212 RFQKL 216
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 208 IHETTYNFIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 387
I E Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 388 ERKYS 402
ERK++
Sbjct: 394 ERKHA 398
>At1g44160.1 68414.m05100 DNAJ chaperone C-terminal
domain-containing protein contains Pfam profile PF01556:
DnaJ C terminal region
Length = 357
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 153 ESFVSDGDDLTVGKFVRLLEGAAGCSGAIS 64
E F +GDDL + V LLE GC +++
Sbjct: 260 EVFKREGDDLEMAVEVSLLEALTGCELSVA 289
>At5g58410.1 68418.m07314 expressed protein contains similarity to
hypothetical proteins
Length = 1873
Score = 26.2 bits (55), Expect = 8.5
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +2
Query: 119 TVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRPHITSS*SATWTS 256
T RSS E QR+ S P W L ST + S SAT TS
Sbjct: 719 TKRSSGQELN----QRIGSRPEHWHHTLIESTAISLVHSSSATTTS 760
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 74 PLHPAAPSRSLTNFPTVRSSP 136
P AA R +TN+P +RS P
Sbjct: 1299 PTENAATERRVTNYPPIRSQP 1319
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 71 APLHPAAPSRSLTNFPTVRSSPSETKDS 154
APL A PSRS+T FP + P E K++
Sbjct: 748 APLSNAQPSRSITFFPL--NPPRELKNA 773
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,857,332
Number of Sequences: 28952
Number of extensions: 207444
Number of successful extensions: 737
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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