Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0247
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   0.82 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   0.82 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 215 YIKYLSFITNNISLFTYISYAKLNVIYSASASTYLPTIVKI 93
           Y+  L F+T N+SL   + Y  +N ++    S     IV +
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSL 218


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 215 YIKYLSFITNNISLFTYISYAKLNVIYSASASTYLPTIVKI 93
           Y+  L F+T N+SL   + Y  +N ++    S     IV +
Sbjct: 178 YVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSL 218


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 61  TNRVSVSGIPFFYLQPGGS 5
           TNR   SG+ + YL   GS
Sbjct: 415 TNRFGTSGLAWLYLNNEGS 433


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 181 ILFVIKLRYLMYDYSVTWSSRNESMQIFKRL*RRFLT 291
           + +V    YL++DY V  +   +  QI   L   F T
Sbjct: 138 VRYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIFFT 174


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 216 IHQISQFYNK*YLFIYIHFIREA*CNLQRFSLYVFAYY 103
           I +I   Y + Y+  ++  I+    NL   SLY+ AY+
Sbjct: 45  ITEIYSVYERRYMNAHLSGIQLVVRNLLDISLYLNAYH 82


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 203 LSFITNNISLFTYISYAKLNVIYSASASTYL 111
           L F  N +S+FTY+      V  +A+  +++
Sbjct: 317 LRFCLNILSIFTYVPMILYCVYTTATYDSFM 347


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 203 LSFITNNISLFTYISYAKLNVIYSASASTYL 111
           L F  N +S+FTY+      V  +A+  +++
Sbjct: 42  LRFCLNILSIFTYVPMILYCVYTTATYDSFM 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,502
Number of Sequences: 336
Number of extensions: 1715
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)