Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0247
         (394 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0891 - 32752825-32752932,32753085-32753176,32753293-327534...    27   7.1  
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058...    26   9.4  

>01_06_0891 -
           32752825-32752932,32753085-32753176,32753293-32753408,
           32754055-32755969,32756037-32756171,32756549-32756870
          Length = 895

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 218 SYIKYLSFITNNISLFTYISYAKLNVIYSASASTYLPT 105
           S+  ++S +TN + +F   +   LN  +SA+     PT
Sbjct: 366 SFFNWMSTLTNGVKVFDETTAVPLNQKFSAATGEEFPT 403


>06_02_0107 -
           11904636-11904699,11904940-11905013,11905671-11905802,
           11910309-11911018,11911110-11911852,11911936-11913753,
           11914037-11914338
          Length = 1280

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 206 YLSFITNNISLFTYISYAKLNVIYSAS 126
           YL  I NNI+L  Y+S  + N+ +  S
Sbjct: 750 YLKAICNNIALLKYLSLRRTNITHLPS 776


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,172,449
Number of Sequences: 37544
Number of extensions: 157295
Number of successful extensions: 283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)