Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0247
         (394 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    28   3.8  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   3.8  

>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 335  EEISRHNKFMSFNSPVRNLLHKRLKICID 249
            +++  H  F    +P+RNL+HK+++   D
Sbjct: 6955 QDLDEHKIFFGNEAPIRNLVHKQIQEAAD 6983


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 335  EEISRHNKFMSFNSPVRNLLHKRLKICID 249
            +++  H  F    +P+RNL+HK+++   D
Sbjct: 6955 QDLDEHKIFFGNEAPIRNLVHKQIQEAAD 6983


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,747,192
Number of Sequences: 53049
Number of extensions: 280569
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)